- Transcript 'Phmamm.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S220.g05613.02.t
Possible name(s)
G3BP1; G3BP2; HNRNPD
Gene model
Location
S220 [122,558 / 126,885]
Amino acid sequence
Length: 492
>Phmamm.CG.MTP2014.S220.g05613.02.p
MFTPSYNFSIFHRFYSINSSYVHGGRYCNGEPEQPVIGQNEIHLKINSLKFHDCRTKIRQ
VDAHSTIGSGVVVQVTGELSNEGMPLRRFMQTFVLAPQGDNPYKFYVHNDIFRYQDEVFM
DNVPNDRSDGEQESEEELEQSQAPTQVPAYQDKYSSQPATNQNLDEPTTLQQPPVMTNGL
DQRLEESPVNEPVSNIPDVQEDQTPSPTRSLTPEIKREPTPTPAIEDLQLDEPPKVVEQP
KEEEAIVETKPTAPKILSWADRASKNTPAQSKTQQGTVVKVHQQPEPTEPTEAPPRAQRP
QRPNQRNYQRDDDRDRGFGDRSDQPRRSGPIGAGTTGPPGGRDQMPIRYPDQQQIFVGNL
PYDISESDLKDHFADFGKVIEVRINHSHSNNPSFGFVIFEECQAVDRVLEVMPTHYKDKH
RINIEEKKQRSARDNNRRIGGDQRRGPGMMGDGRGARRGGGGGPMGIRRDRQGSREARDG
QPRPSHNTGQRR
Nucleotide sequence
Length: 1,479
>Phmamm.CG.MTP2014.S220.g05613.02.t
ATGTTCACTCCAAGTTATAACTTCAGCATATTTCACAGATTCTACAGCATTAATTCATCC
TATGTGCATGGAGGAAGGTACTGCAATGGTGAACCTGAGCAGCCTGTTATTGGCCAAAAT
GAGATTCACTTGAAAATCAACTCCTTGAAGTTTCATGATTGTCGAACCAAGATTCGCCAG
GTTGATGCCCATTCAACAATTGGCAGTGGAGTTGTGGTGCAGGTCACTGGTGAACTCTCC
AATGAAGGAATGCCTCTTAGACGCTTTATGCAAACCTTTGTGTTGGCACCTCAGGGAGAC
AACCCATACAAGTTTTATGTTCACAATGATATCTTTCGATATCAGGATGAGGTTTTTATG
GACAATGTTCCTAATGATAGATCTGATGGTGAACAAGAATCAGAAGAGGAACTGGAACAG
TCTCAGGCTCCAACACAAGTTCCTGCCTATCAAGACAAGTACTCCAGTCAACCAGCCACT
AACCAGAACTTGGACGAGCCTACAACCCTGCAGCAACCACCTGTCATGACTAACGGATTG
GACCAACGACTTGAAGAAAGCCCTGTGAACGAACCTGTCTCTAACATCCCTGATGTTCAG
GAGGACCAGACCCCATCTCCTACAAGATCTTTGACACCGGAAATCAAACGAGAGCCCACC
CCCACCCCAGCAATAGAAGACTTACAACTGGATGAACCCCCAAAAGTTGTTGAGCAACCA
AAAGAAGAGGAAGCTATTGTGGAAACTAAACCAACTGCTCCTAAAATCTTGTCATGGGCA
GATCGTGCATCAAAAAATACACCAGCTCAATCCAAAACACAGCAAGGAACAGTTGTTAAA
GTTCACCAGCAACCAGAACCAACAGAGCCAACTGAAGCACCGCCAAGGGCCCAACGTCCA
CAAAGACCAAACCAGAGGAATTACCAGCGGGATGATGATCGTGATCGTGGTTTTGGTGAC
AGGTCAGATCAACCAAGACGTTCTGGGCCTATTGGAGCTGGTACCACTGGCCCACCCGGG
GGTCGCGACCAGATGCCAATCAGATATCCTGACCAGCAACAAATCTTTGTTGGAAATTTG
CCTTATGACATTTCTGAAAGTGATTTAAAAGACCATTTTGCAGATTTTGGAAAAGTTATT
GAGGTTCGAATCAACCATTCACACTCCAACAATCCAAGCTTTGGTTTTGTCATTTTCGAG
GAATGTCAAGCTGTTGACCGTGTTCTGGAAGTCATGCCGACGCATTACAAAGACAAGCAC
CGTATCAACATAGAGGAAAAGAAGCAGCGTAGCGCAAGGGACAACAATAGACGGATTGGT
GGCGACCAGAGACGTGGCCCAGGCATGATGGGCGATGGTCGTGGTGCCAGACGCGGCGGC
GGTGGCGGCCCAATGGGAATAAGACGTGATCGGCAAGGTTCCAGAGAAGCTCGGGATGGC
CAACCTCGGCCAAGTCATAACACAGGCCAGCGTCGGTGA
| CDD |
Nuclear_transport_factor_2_euk (IPR018222) - T[1-116] 6.32911E-30 |
| ProSiteProfiles |
Nuclear_transport_factor_2_euk (IPR018222) - T[1-114] 20.272 |
| SUPERFAMILY |
NTF2-like_dom_sf (IPR032710) - T[7-115] 5.65E-23 |
| PANTHER |
G3BP2 (IPR034377) - T[11-475] 1.5E-95 |
| Pfam |
NTF2 (IPR002075) - T[12-114] 7.7E-20 |
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[258-438] 7.5E-19 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[344-461] 6.31E-22 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[353-429] 14.556 |
| SMART |
RRM_dom (IPR000504) - T[354-425] 4.5E-14 |
| Pfam |
RRM_dom (IPR000504) - T[355-420] 1.2E-13 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| G3BP2_HUMAN | 39.101 % | 233 | 3.87E-71 |
| G3BP1_HUMAN | 38.161 % | 236 | 2.1E-72 |