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TRANSCRIPT CARD

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  1. Clone 'AHC2BAA29YM02'
  2. Transcript 'Phmamm.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S220.g05613.02.t

Possible name(s)

G3BP1; G3BP2; HNRNPD

Location

S220 [122,558 / 126,885]

Sequences

Amino acid sequence

Length: 492

>Phmamm.CG.MTP2014.S220.g05613.02.p
MFTPSYNFSIFHRFYSINSSYVHGGRYCNGEPEQPVIGQNEIHLKINSLKFHDCRTKIRQ
VDAHSTIGSGVVVQVTGELSNEGMPLRRFMQTFVLAPQGDNPYKFYVHNDIFRYQDEVFM
DNVPNDRSDGEQESEEELEQSQAPTQVPAYQDKYSSQPATNQNLDEPTTLQQPPVMTNGL
DQRLEESPVNEPVSNIPDVQEDQTPSPTRSLTPEIKREPTPTPAIEDLQLDEPPKVVEQP
KEEEAIVETKPTAPKILSWADRASKNTPAQSKTQQGTVVKVHQQPEPTEPTEAPPRAQRP
QRPNQRNYQRDDDRDRGFGDRSDQPRRSGPIGAGTTGPPGGRDQMPIRYPDQQQIFVGNL
PYDISESDLKDHFADFGKVIEVRINHSHSNNPSFGFVIFEECQAVDRVLEVMPTHYKDKH
RINIEEKKQRSARDNNRRIGGDQRRGPGMMGDGRGARRGGGGGPMGIRRDRQGSREARDG
QPRPSHNTGQRR

Nucleotide sequence

Length: 1,479

>Phmamm.CG.MTP2014.S220.g05613.02.t
ATGTTCACTCCAAGTTATAACTTCAGCATATTTCACAGATTCTACAGCATTAATTCATCC
TATGTGCATGGAGGAAGGTACTGCAATGGTGAACCTGAGCAGCCTGTTATTGGCCAAAAT
GAGATTCACTTGAAAATCAACTCCTTGAAGTTTCATGATTGTCGAACCAAGATTCGCCAG
GTTGATGCCCATTCAACAATTGGCAGTGGAGTTGTGGTGCAGGTCACTGGTGAACTCTCC
AATGAAGGAATGCCTCTTAGACGCTTTATGCAAACCTTTGTGTTGGCACCTCAGGGAGAC
AACCCATACAAGTTTTATGTTCACAATGATATCTTTCGATATCAGGATGAGGTTTTTATG
GACAATGTTCCTAATGATAGATCTGATGGTGAACAAGAATCAGAAGAGGAACTGGAACAG
TCTCAGGCTCCAACACAAGTTCCTGCCTATCAAGACAAGTACTCCAGTCAACCAGCCACT
AACCAGAACTTGGACGAGCCTACAACCCTGCAGCAACCACCTGTCATGACTAACGGATTG
GACCAACGACTTGAAGAAAGCCCTGTGAACGAACCTGTCTCTAACATCCCTGATGTTCAG
GAGGACCAGACCCCATCTCCTACAAGATCTTTGACACCGGAAATCAAACGAGAGCCCACC
CCCACCCCAGCAATAGAAGACTTACAACTGGATGAACCCCCAAAAGTTGTTGAGCAACCA
AAAGAAGAGGAAGCTATTGTGGAAACTAAACCAACTGCTCCTAAAATCTTGTCATGGGCA
GATCGTGCATCAAAAAATACACCAGCTCAATCCAAAACACAGCAAGGAACAGTTGTTAAA
GTTCACCAGCAACCAGAACCAACAGAGCCAACTGAAGCACCGCCAAGGGCCCAACGTCCA
CAAAGACCAAACCAGAGGAATTACCAGCGGGATGATGATCGTGATCGTGGTTTTGGTGAC
AGGTCAGATCAACCAAGACGTTCTGGGCCTATTGGAGCTGGTACCACTGGCCCACCCGGG
GGTCGCGACCAGATGCCAATCAGATATCCTGACCAGCAACAAATCTTTGTTGGAAATTTG
CCTTATGACATTTCTGAAAGTGATTTAAAAGACCATTTTGCAGATTTTGGAAAAGTTATT
GAGGTTCGAATCAACCATTCACACTCCAACAATCCAAGCTTTGGTTTTGTCATTTTCGAG
GAATGTCAAGCTGTTGACCGTGTTCTGGAAGTCATGCCGACGCATTACAAAGACAAGCAC
CGTATCAACATAGAGGAAAAGAAGCAGCGTAGCGCAAGGGACAACAATAGACGGATTGGT
GGCGACCAGAGACGTGGCCCAGGCATGATGGGCGATGGTCGTGGTGCCAGACGCGGCGGC
GGTGGCGGCCCAATGGGAATAAGACGTGATCGGCAAGGTTCCAGAGAAGCTCGGGATGGC
CAACCTCGGCCAAGTCATAACACAGGCCAGCGTCGGTGA

InterProScan

CDD
Nuclear_transport_factor_2_euk (IPR018222) - T[1-116] 6.32911E-30
ProSiteProfiles
Nuclear_transport_factor_2_euk (IPR018222) - T[1-114] 20.272
SUPERFAMILY
NTF2-like_dom_sf (IPR032710) - T[7-115] 5.65E-23
PANTHER
G3BP2 (IPR034377) - T[11-475] 1.5E-95
Pfam
NTF2 (IPR002075) - T[12-114] 7.7E-20
Gene3D
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[258-438] 7.5E-19
SUPERFAMILY
RBD_domain_sf (IPR035979) - T[344-461] 6.31E-22
ProSiteProfiles
RRM_dom (IPR000504) - T[353-429] 14.556
SMART
RRM_dom (IPR000504) - T[354-425] 4.5E-14
Pfam
RRM_dom (IPR000504) - T[355-420] 1.2E-13

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
G3BP2_HUMAN 39.101 % 233 3.87E-71
G3BP1_HUMAN 38.161 % 236 2.1E-72