- Clone 'cicl045e23' >
- EST 'BW513482' >
- Transcript 'Phmamm.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S220.g05613.01.t
Possible name(s)
G3BP1; G3BP2; HNRNPD
Gene model
Location
S220 [121,741 / 128,579]
Amino acid sequence
Length: 512
>Phmamm.CG.MTP2014.S220.g05613.01.p
MVMMEKPSPIQVGREFVRQYYTLLNKAPELLHRFYSINSSYVHGGRYCNGEPEQPVIGQN
EIHLKINSLKFHDCRTKIRQVDAHSTIGSGVVVQVTGELSNEGMPLRRFMQTFVLAPQGD
NPYKFYVHNDIFRYQDEVFMDNVPNDRSDGEQESEEELEQSQAPTQVPAYQDKYSSQPAT
NQNLDEPTTLQQPPVMTNGLDQRLEESPVNEPVSNIPDVQEDQTPSPTRSLTPEIKREPT
PTPAIEDLQLDEPPKVVEQPKEEEAIVETKPTAPKILSWADRASKNTPAQSKTQQGTVVK
VHQQPEPTEPTEAPPRAQRPQRPNQRNYQRDDDRDRGFGDRSDQPRRSGPIGAGTTGPPG
GRDQMPIRYPDQQQIFVGNLPYDISESDLKDHFADFGKVIEVRINHSHSNNPSFGFVIFE
ECQAVDRVLEVMPTHYKDKHRINIEEKKQRSARDNNRRIGGDQRRGPGMMGDGRGARRGG
GGGPMGIRRDRQGSREARDGQPRPSHNTGQRR
Nucleotide sequence
Length: 3,269
>Phmamm.CG.MTP2014.S220.g05613.01.t
TAGCACACAGGCTTTCATTTTAGTTGTTACTAAGCAATGGTAATGATGGAAAAACCAAGC
CCCATCCAAGTCGGGCGCGAGTTCGTGCGCCAGTATTACACATTGTTAAATAAAGCTCCA
GAACTGCTTCACAGATTCTACAGCATTAATTCATCCTATGTGCATGGAGGAAGGTACTGC
AATGGTGAACCTGAGCAGCCTGTTATTGGCCAAAATGAGATTCACTTGAAAATCAACTCC
TTGAAGTTTCATGATTGTCGAACCAAGATTCGCCAGGTTGATGCCCATTCAACAATTGGC
AGTGGAGTTGTGGTGCAGGTCACTGGTGAACTCTCCAATGAAGGAATGCCTCTTAGACGC
TTTATGCAAACCTTTGTGTTGGCACCTCAGGGAGACAACCCATACAAGTTTTATGTTCAC
AATGATATCTTTCGATATCAGGATGAGGTTTTTATGGACAATGTTCCTAATGATAGATCT
GATGGTGAACAAGAATCAGAAGAGGAACTGGAACAGTCTCAGGCTCCAACACAAGTTCCT
GCCTATCAAGACAAGTACTCCAGTCAACCAGCCACTAACCAGAACTTGGACGAGCCTACA
ACCCTGCAGCAACCACCTGTCATGACTAACGGATTGGACCAACGACTTGAAGAAAGCCCT
GTGAACGAACCTGTCTCTAACATCCCTGATGTTCAGGAGGACCAGACCCCATCTCCTACA
AGATCTTTGACACCGGAAATCAAACGAGAGCCCACCCCCACCCCAGCAATAGAAGACTTA
CAACTGGATGAACCCCCAAAAGTTGTTGAGCAACCAAAAGAAGAGGAAGCTATTGTGGAA
ACTAAACCAACTGCTCCTAAAATCTTGTCATGGGCAGATCGTGCATCAAAAAATACACCA
GCTCAATCCAAAACACAGCAAGGAACAGTTGTTAAAGTTCACCAGCAACCAGAACCAACA
GAGCCAACTGAAGCACCGCCAAGGGCCCAACGTCCACAAAGACCAAACCAGAGGAATTAC
CAGCGGGATGATGATCGTGATCGTGGTTTTGGTGACAGGTCAGATCAACCAAGACGTTCT
GGGCCTATTGGAGCTGGTACCACTGGCCCACCCGGGGGTCGCGACCAGATGCCAATCAGA
TATCCTGACCAGCAACAAATCTTTGTTGGAAATTTGCCTTATGACATTTCTGAAAGTGAT
TTAAAAGACCATTTTGCAGATTTTGGAAAAGTTATTGAGGTTCGAATCAACCATTCACAC
TCCAACAATCCAAGCTTTGGTTTTGTCATTTTCGAGGAATGTCAAGCTGTTGACCGTGTT
CTGGAAGTCATGCCGACGCATTACAAAGACAAGCACCGTATCAACATAGAGGAAAAGAAG
CAGCGTAGCGCAAGGGACAACAATAGACGGATTGGTGGCGACCAGAGACGTGGCCCAGGC
ATGATGGGCGATGGTCGTGGTGCCAGACGCGGCGGCGGTGGCGGCCCAATGGGAATAAGA
CGTGATCGGCAAGGTTCCAGAGAAGCTCGGGATGGCCAACCTCGGCCAAGTCATAACACA
GGCCAGCGTCGGTGACCAAGTCGAAATCCAAAGTGAAAAAAAAGAATTCGTTTCTGATGC
TACTGTTGATGTTATTCTTTCTCCTTAACCTGGCAGCTTTTGACGACTGTTGTTTTTTCT
CACATTCTGGGCGCCCCCGGATTTTCTAGGCCAATCTTTTCCTTAATCTCGGCGTACGCT
GCTTCGATAGCTTCGCAACATGGCTGTGAGTTCGCGCATGCGCAGTGCGTGGCAGTGACG
TCCAGTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGTGGATTTTAAGTTTTA
TTTATTGCCCCGGCGCTTTTTACGAAGATCCGCCGGGGTCGCCAAGCCTTCACTTTTCAC
AGGTGTTTGAACTGAAGTATCGCGCCAGTTACACCGAATTTTTCCTGTTATTGGTCCGAC
CTGACCCCCCATTTACCCCTTTTTACTCCCTACACCCTAATTACTACGCTAAACCGGCAA
AAAAATGGATTTCATATTGATCATTTGCAGGGACGCATGCATTACATTAAAACATCAGCA
CGTGTTAGTCATTAGCAAGTGTGACCGCTACAAGTATTGAAACCGCGAGCAAAATTATTT
TTTTCTGTACAACCGTTTATATTTTATACACGTCTGGCAGTTATGAATTTCAAAGACAAT
TACTCCAGCTAAGTCACAAAAAGGTAAAATTTGCCCATTTTCCATCTCGAATGTTCAATC
AAGTTCGACCCCCTTCGTAGTTCATCTTATACACATATACATTTTCTCGTATTTGGTGCA
AACTGTGTTACAATTACCCAAGTGCTTCGAGATTTTCAAATACGACCCTTTGCAGGCAGT
AGACTTTGAACAGCTAAACCCTATTTCGGACTACCTGTAGCACTGTAGCGTATTTATTAC
GACTTCGGCCCAAATCATTATAACACGGAAAAATGTGTATTAAACGCATTGAAGCAACGG
TGTAAACAATAAACATGCGAATTTTTAAATATCTTTGCGCCAAATTCGCCTACCTAATTA
AACCCGATAAAGTGTTTAAAGCATTCACATAATTTCCAGCAATCCATATCTATAAAATGT
AACTTTGCGAAAATCATTTCTGCCTACCAAATTCTGATGCTAAAATATTCTTTTCCCCAA
AGCTGCTATTCTACACAAACCATTGGCTTGTAAATTTTGTACTTTAGCTCCATCTAGTGT
TCAAAGCTCATTTTCTGAATTGGGCTTTTGTACAGCAGCTGGTCGTGCCGCGCAAATTCC
CTGTGAAAATTTCTTCGCCTGCGTAAACCCACCGGTGATACGCGCTCCTGAATGCACAGT
TTTTGTTGTCGTTCGTGTGTAAAACGCAAAAACGTCGGAATTACATTTCTTTGGTAATAA
TCTGATGCCTTTCTATACACAGTCATATAGAATTTAACCTCTTTTACAAATGTTTAAGGA
CGATACTTGAATGAAAAGATAGCAGTCAGTTGAAACAAAAGTTGCAAGAGATATCCCGGG
ACAAAAATCGATTGCTTTTTTAAGTTGCACACTTTAACCAGAGGTGCGACACCCACCGGG
TTTCTGTGAATCTGAGGGTTCCACGAGGTTTCTTGTAAGATTTCGAACAGGATTGATAAA
TAGTTCTGTTGTTGCAAACAATACAACAGTGTTGGAACTCTCATTATAGCTCTCCAGTTG
GTAAAAATCTGGCAATCTGTAAAATGCCG
| SUPERFAMILY |
NTF2-like_dom_sf (IPR032710) - T[2-138] 1.07E-33 |
| PANTHER |
G3BP2 (IPR034377) - T[3-495] 1.3E-114 |
| CDD |
Nuclear_transport_factor_2_euk (IPR018222) - T[8-136] 2.01511E-42 |
| ProSiteProfiles |
Nuclear_transport_factor_2_euk (IPR018222) - T[12-134] 28.777 |
| Pfam |
NTF2 (IPR002075) - T[12-134] 1.1E-28 |
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[280-458] 7.5E-19 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[363-481] 6.72E-22 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[373-449] 14.556 |
| SMART |
RRM_dom (IPR000504) - T[374-445] 4.5E-14 |
| Pfam |
RRM_dom (IPR000504) - T[375-440] 1.3E-13 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| G3BP2_HUMAN | 41.983 % | 285 | 9.83E-91 |
| G3BP1_HUMAN | 40.821 % | 286 | 1.99E-91 |