- Transcript 'KH2012:KH.L172.2.v1....' >
- Transcript 'KH2012:KH.C9.662.v1....' >
- Transcript 'Cisavi.CG.ENS81.R0.1...' >
- Transcript 'Cisavi.CG.ENS81.R156...' >
- Transcript 'Phmamm.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S2196.g16352.01.t
Possible name(s)
DNMT1; KDM2B; KMT2B
Gene model
Location
S2196 [3,990 / 10,112]
Amino acid sequence
Length: 1,327
>Phmamm.CG.MTP2014.S2196.g16352.01.p
MSAGECETLAQLEDKNKTKKGESSPPARQASIMEMFKRKPKRKASATALESICKTKDTPT
TTSEETCSRDGKRARIDQNVMNGEVVSNIDKENIQPSKDSKPASDQQSMKSDKKVESTKC
RECRQHLTDVKLFPGDPPGSEEEFVVLTHESLALFVGNEETGRPQHKITDFTVYDKTTHV
CSFDSGLVERNVELFFSGVIKPVYDEDSSTDNGVPGSRFGPINEWWTAGFDGGERALVGF
STAFADYYLMEPSALYKEHWSSVQEKIYMSKNVIEFLSDNPAAAYEDLVNRIQTTVPPPA
LGLNRFTEDSLLRHAQFVVEQVESYDSARTDDEDSLLGTPCMRDLIHLAGVTLGKRRAAR
RTNIMKEKKHVKASSTKATTTQLVAEIMEQFFQGTVDASTGSKIRRRRCGVCEACLRPEC
GKCPACRDMVKFGGKGTAKQTCVQRKCPNLGIELDDEPEPEPEIDDVAVPEKPKQSPHKA
VKAKKSIKAKARWNGESVLSNKTCSFYASVQLGENSYDVGDCVSVLSDTPEKQPFIGRIV
YLFEEESSGEKMVHLDWFLRATESILQEVADPGELLLVDDCENVGVECIHGRVEVFHRSP
HPDWFAIGGVADDRKFPKCDGVSSFFYQKWYDSTCARFLDPPVMQIPDDVDYCPACDRHN
AKIREANPVARDELRSEDTKVYYGKAAKDGVEYCIGDCAYLPVEAFSFSNKLKTPQKKQL
PKTIDEIDEDEYPEYYRKGSYVKGSNETVAKPFRIARITSIFCNNVKKSGAKINMTVTKF
YRPENTHKSVKSTYFCDLNLLYWTDEEVTLDFDLVEGKCRVECEYDLTAPPPPENTHKSV
KSTYFCDLNLLYWTDEVVTLDFDLVEGKCRVECEYDLTIPPAEYSRNGADRFYFSQAYNA
KEKEFYDPPMQSRRTGVKQMIQDARRCQTKMTKLTKVKLTKADAKKDVEMIEESEQPYEK
LRCLDVFSGCGGLSEGFHQAGITNPAYAIELWEPAAQAYRLNNPGATVFTEDCNVLLEMV
MTGQEKSSCGQRLPQKGDVDLLCGGPPCQGFSGMNRFNSREYSRFKNSLVVSYLSYCDYF
RPRFFLLENAGHYGVAQTRRRAIILAAAPGEQLPLYPEPLHTFSTRGGSLSAQIGDQRYS
SNIKRLTSAPFRTITVRDTMSDLPKIPNGHAKLEISYRGESESQFQRMIRAGGYQAVLRD
HICKEMSPLVAARMSLIPRLPGSDWRDLPNKVVKLSDGSMTKLLRYDYKDKKQGRVLHPE
QNRVVSVRECARSQGFPDSYRFFGTILDKHREVGNAVPPPMAKAIGLEIKKCLQWKQLKE
MKSEELN
Nucleotide sequence
Length: 3,984
>Phmamm.CG.MTP2014.S2196.g16352.01.t
ATGTCGGCTGGAGAATGCGAAACTTTGGCCCAACTGGAGGATAAAAATAAAACGAAAAAA
GGCGAGTCTTCGCCTCCAGCAAGACAGGCCAGCATCATGGAAATGTTTAAAAGGAAACCG
AAACGCAAAGCATCAGCAACTGCATTAGAAAGCATTTGCAAAACTAAAGACACTCCAACA
ACAACCAGTGAAGAAACATGCTCAAGAGATGGTAAACGGGCACGTATTGACCAGAATGTG
ATGAATGGTGAGGTTGTATCCAACATTGACAAAGAAAACATTCAACCAAGTAAAGATTCT
AAACCTGCATCTGATCAGCAATCCATGAAAAGTGACAAGAAAGTGGAAAGTACCAAGTGC
CGTGAGTGTAGGCAACATTTAACTGATGTGAAACTATTTCCTGGTGATCCTCCTGGATCT
GAGGAGGAGTTTGTGGTTCTAACTCATGAATCGTTGGCTTTGTTTGTGGGAAATGAGGAA
ACTGGCAGACCACAGCACAAAATAACGGACTTCACCGTGTATGACAAAACTACTCATGTA
TGTTCATTCGATTCTGGTCTTGTTGAGCGGAATGTGGAACTGTTCTTTAGTGGAGTTATC
AAACCAGTATATGATGAGGATTCAAGCACTGATAATGGTGTACCTGGTTCCAGATTTGGT
CCAATCAATGAATGGTGGACAGCAGGATTTGATGGTGGTGAAAGAGCATTGGTTGGTTTC
TCCACTGCATTTGCTGACTATTATTTAATGGAACCTTCCGCCTTGTACAAGGAACACTGG
TCCAGTGTGCAAGAGAAAATTTACATGAGCAAAAATGTTATCGAGTTTTTGTCTGATAAC
CCTGCGGCAGCATATGAAGATTTGGTGAATCGTATTCAGACCACAGTTCCACCTCCAGCA
TTGGGTCTGAACAGATTTACTGAAGATTCTTTGCTGCGACATGCACAGTTTGTAGTTGAG
CAGGTGGAATCCTATGACTCAGCAAGAACTGACGATGAAGATTCATTACTCGGCACTCCT
TGTATGAGGGATCTTATACACTTGGCTGGTGTGACATTGGGCAAACGTAGAGCGGCCAGA
AGAACAAACATCATGAAGGAAAAGAAACATGTCAAGGCCTCGTCTACAAAGGCTACAACC
ACTCAGTTGGTGGCCGAAATTATGGAGCAATTTTTTCAAGGAACCGTGGATGCTTCTACT
GGAAGCAAAATTAGAAGACGAAGGTGCGGCGTTTGTGAAGCCTGCCTTCGGCCAGAATGT
GGAAAATGCCCTGCATGTCGTGACATGGTAAAGTTTGGTGGAAAAGGAACAGCCAAGCAA
ACCTGCGTACAGCGGAAATGTCCGAACCTTGGCATCGAACTGGACGACGAACCGGAACCT
GAACCGGAAATAGATGACGTCGCGGTCCCGGAAAAACCCAAGCAGTCGCCTCACAAAGCA
GTAAAAGCAAAGAAGAGCATCAAAGCCAAAGCCAGGTGGAATGGCGAATCGGTTTTGTCA
AATAAAACATGCTCGTTTTATGCCTCGGTGCAGTTGGGCGAGAACTCCTATGATGTTGGA
GACTGTGTATCAGTGCTTAGCGACACTCCAGAGAAGCAACCGTTTATCGGACGCATTGTT
TACCTATTTGAAGAAGAGAGCAGTGGAGAGAAAATGGTTCACCTTGATTGGTTCCTCCGT
GCCACTGAGTCAATCCTCCAAGAGGTGGCAGATCCTGGAGAACTACTTCTTGTTGACGAT
TGTGAAAATGTAGGAGTGGAGTGCATACATGGGAGGGTGGAAGTCTTTCACCGTTCCCCT
CATCCAGATTGGTTTGCGATTGGAGGAGTAGCTGATGATCGCAAGTTTCCAAAATGCGAC
GGTGTGTCAAGTTTCTTTTACCAGAAGTGGTACGACAGCACTTGTGCTCGCTTTTTAGAT
CCTCCTGTAATGCAGATCCCAGATGATGTGGACTATTGTCCTGCCTGCGATCGCCACAAC
GCTAAAATACGCGAAGCAAATCCAGTGGCAAGAGATGAGCTCCGCTCCGAAGACACCAAG
GTTTACTATGGCAAGGCCGCCAAAGACGGTGTGGAGTATTGCATTGGAGATTGTGCGTAT
CTGCCGGTAGAGGCTTTCTCGTTCAGCAACAAGTTGAAGACGCCACAGAAGAAGCAACTT
CCAAAGACGATAGACGAGATTGATGAAGATGAATATCCTGAATATTACAGAAAGGGTAGT
TATGTCAAAGGGAGCAACGAAACAGTAGCAAAGCCATTTCGAATTGCCAGGATCACTTCA
ATATTTTGCAACAACGTGAAAAAATCGGGGGCCAAGATAAACATGACTGTCACCAAATTT
TATAGACCTGAAAACACGCACAAAAGTGTCAAGTCAACTTACTTTTGTGATCTGAACCTG
TTGTATTGGACGGATGAAGAAGTAACCCTGGATTTTGACTTGGTGGAAGGTAAATGCCGT
GTTGAATGCGAATACGACCTTACCGCCCCCCCCCCACCTGAAAACACGCACAAAAGTGTC
AAGTCAACTTACTTTTGTGATCTTAACTTATTGTATTGGACAGATGAAGTAGTAACGCTG
GATTTTGACTTGGTCGAAGGTAAATGTCGTGTTGAATGCGAATACGACCTTACCATACCC
CCAGCCGAGTATTCACGCAACGGCGCCGATCGTTTTTACTTCAGCCAGGCTTATAACGCC
AAAGAAAAGGAGTTTTATGACCCTCCAATGCAGTCTAGGCGCACTGGTGTGAAACAGATG
ATTCAAGATGCCCGTCGCTGCCAAACCAAAATGACCAAACTTACTAAAGTGAAACTGACT
AAAGCAGACGCCAAAAAGGATGTGGAGATGATAGAAGAATCAGAGCAGCCGTATGAGAAG
CTACGTTGCTTGGATGTGTTTTCTGGTTGCGGTGGCTTGTCTGAAGGCTTTCACCAAGCC
GGCATTACCAATCCTGCCTATGCTATTGAGTTGTGGGAGCCTGCAGCTCAGGCCTATCGC
CTAAACAACCCTGGAGCTACTGTTTTTACAGAAGACTGCAATGTGCTTTTAGAGATGGTG
ATGACCGGGCAAGAAAAAAGCAGTTGCGGACAAAGGCTGCCGCAAAAGGGTGATGTTGAC
CTCTTGTGTGGGGGACCGCCTTGTCAAGGTTTCAGTGGCATGAACCGTTTCAACTCGCGA
GAGTATTCCCGTTTCAAAAACTCGCTAGTGGTGTCTTACCTCTCCTACTGCGATTACTTC
AGGCCTCGTTTCTTCCTCCTGGAAAACGCAGGGCACTACGGTGTTGCACAGACCCGTCGT
CGTGCAATTATTCTTGCCGCAGCACCGGGCGAGCAGTTACCGCTCTATCCAGAACCTCTC
CACACTTTCTCAACGCGCGGCGGTAGCTTGTCGGCCCAAATTGGCGACCAGCGGTACTCA
AGCAACATCAAGCGTCTCACATCAGCACCTTTCCGAACAATAACAGTGCGAGACACGATG
TCGGATTTGCCGAAAATTCCTAACGGCCACGCGAAGCTCGAGATATCTTATCGAGGGGAA
AGCGAAAGTCAGTTTCAACGGATGATACGCGCTGGAGGTTACCAGGCTGTTCTGCGCGAC
CACATCTGTAAGGAGATGAGTCCATTGGTCGCAGCTCGCATGAGTCTCATTCCACGCCTT
CCTGGTTCCGACTGGCGCGATTTACCAAACAAAGTCGTCAAGCTCTCTGACGGCTCCATG
ACAAAACTCCTACGTTACGACTACAAGGATAAGAAACAGGGAAGGGTTCTGCATCCTGAA
CAGAACCGAGTGGTTAGCGTGAGGGAGTGCGCCCGTTCGCAAGGCTTTCCCGATTCTTAC
CGCTTTTTCGGCACTATTTTGGATAAGCACCGGGAGGTTGGTAATGCTGTTCCACCGCCG
ATGGCTAAAGCTATTGGTCTTGAAATTAAGAAGTGTCTTCAGTGGAAGCAATTAAAGGAA
ATGAAGTCCGAAGAATTAAACTAA
| PIRSF |
DNMT1-like (IPR017198) - T[3-830] 9.8E-263 - T[831-1091] 5.1E-119 - T[1089-1254] 4.6E-80 - T[1251-1327] 1.8E-39 |
| Pfam |
Cytosine_MeTrfase1_RFD (IPR022702) - T[161-294] 4.9E-41 |
| ProSiteProfiles |
Znf_CXXC (IPR002857) - T[402-448] 13.999 |
| Pfam |
Znf_CXXC (IPR002857) - T[403-447] 3.1E-14 |
| SMART |
BAH_dom (IPR001025) - T[515-642] 2.8E-24 - T[691-909] 9.3E-14 |
| ProSiteProfiles |
BAH_dom (IPR001025) - T[515-642] 16.116 - T[734-909] 14.093 |
| Pfam |
BAH_dom (IPR001025) - T[516-641] 2.0E-14 - T[735-848] 4.9E-13 |
| SUPERFAMILY |
SAM-dependent_MTases (IPR029063) - T[960-1310] 2.67E-67 |
| ProSiteProfiles |
C5_MeTfrase (IPR001525) - T[961-1316] 41.476 |
| PRINTS |
C5_MeTfrase (IPR001525) - T[962-978] 1.1E-7 - T[1094-1107] 1.1E-7 |
| ProSitePatterns |
C5_DNA_meth_AS (IPR018117) - T[1040-1052] . |
| Pfam |
C5_MeTfrase (IPR001525) - T[1089-1311] 4.2E-18 |
| ProSitePatterns |
C5_meth_CS (IPR031303) - T[1291-1309] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DNMT1_HUMAN | 49.162 % | 1099 | 0 |