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TRANSCRIPT CARD

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  1. Transcript 'Boleac.CG.SB_v3.S0.g...' > 
  2. Transcript 'KH2012:KH.L153.115.v...' > 
  3. Transcript 'Phmamm.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S2180.g16327.05.t

Possible name(s)

HMBS

Gene model

Phmamm.CG.MTP2014.S2180.g16327

Location

S2180 [15,421 / 17,774]

Sequences

Amino acid sequence

Length: 251

>Phmamm.CG.MTP2014.S2180.g16327.05.p
MKYRACATTSTELLSFSCHESEGKNAIHPVRYFLTRMKEKSRFVAAKIWTAQLISPDSRL
AMIQTNWVVQELKKLHHDLRIEIIQMSTIGDKILDKSLSKTGEKSLFTKELEDALLAHKV
DLVVNSLKDMPSTLPTNLTISAVSKREDPRDAVIMHPTNKGKTLKELSTGSVVGTSSLRR
IAQLKKLFPHLKFKSITDQCLYAIGQGALAIETRADDAQSIKFVEELHDRDTVIRTVAER
AFLKTLVIQFE

Nucleotide sequence

Length: 756

>Phmamm.CG.MTP2014.S2180.g16327.05.t
ATGAAATATCGTGCCTGCGCGACGACCTCTACTGAACTGCTGTCATTCTCATGCCACGAG
AGCGAAGGAAAGAATGCAATACATCCGGTTCGCTACTTTCTTACAAGAATGAAAGAAAAA
AGCCGTTTCGTTGCAGCTAAAATCTGGACTGCCCAGCTTATCAGTCCAGACTCCAGATTG
GCCATGATTCAAACCAACTGGGTGGTACAAGAGTTAAAAAAGTTGCACCATGACCTTCGA
ATTGAAATCATTCAGATGAGCACAATTGGGGACAAAATTTTGGATAAATCTCTTTCAAAG
ACCGGTGAGAAAAGTCTTTTTACAAAAGAACTTGAAGATGCTCTTCTTGCTCATAAGGTG
GACCTTGTTGTAAACTCTCTGAAAGATATGCCATCTACACTGCCTACCAATTTGACCATA
TCAGCTGTATCCAAACGGGAAGATCCCCGGGATGCTGTTATCATGCACCCTACAAACAAA
GGAAAAACGCTTAAAGAATTATCTACAGGGAGTGTTGTTGGAACAAGCTCCTTGCGTCGT
ATTGCTCAATTGAAGAAACTTTTTCCTCATTTGAAGTTTAAAAGCATTACAGATCAATGC
CTATATGCAATTGGTCAAGGTGCTTTGGCTATTGAGACAAGAGCTGATGATGCACAGAGC
ATAAAGTTTGTTGAGGAACTTCATGATCGTGACACTGTTATACGAACTGTGGCTGAACGT
GCCTTTTTGAAAACTTTGGTAATTCAGTTTGAATAA

InterProScan

PANTHER
HemC (IPR000860) - T[55-196] 1.3E-70 - T[198-246] 1.3E-70
Pfam
Porphobilin_deaminase_N (IPR022417) - T[56-196] 4.3E-47
PRINTS
HemC (IPR000860) - T[90-110] 3.6E-25 - T[121-140] 3.6E-25 - T[172-189] 3.6E-25

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
HEM3_HUMAN 49.13 % 205 7.65E-65