- Transcript 'Phmamm.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S2180.g16327.04.t
Possible name(s)
HMBS
Gene model
Location
S2180 [12,377 / 17,799]
Amino acid sequence
Length: 356
>Phmamm.CG.MTP2014.S2180.g16327.04.p
MDNKLIKVGTRKSQLAMIQTNWVVQELKKLHHDLRIEIIQMSTIGDKILDKSLSKTGEKS
LFTKELEDALLAHKVDLVVNSLKDMPSTLPTNLTISAVSKREDPRDAVIMHPTNKGKTLK
ELSTGSVVGTSSLRRIAQLKKLFPHLKFKSIRGNLNTRLHKLDSADTFSAIILAVAGVKR
MGWSERISYILPTDQCLYAIGQGALAIETRADDAQSIKFVEELHDRDTVIRTVAERAFLK
TLGGGCSVPQAVHTWIDDSQLYMTGGVFNLNGSRSLIETMQTQLPNQEASVIEPVDPDTC
CEFASITTSHKLLDAGFLKAAGHLGRDLALLLLKKGARDILDEARQQNLANENDVV
Nucleotide sequence
Length: 2,320
>Phmamm.CG.MTP2014.S2180.g16327.04.t
TTTTCGTGTATAATTAATGCATGACATGAAATATCGTGCCTGCGCGACGACCTCTACTGA
ACTGCTGTCATTCTCATGCCACGAGAGCGAAGGAAAGAATGCAATACATCCGGTTCGCTA
CTTTCTTACAAGAATGAAAGAAAAAAGCCGTTTCGTTGCAGCTAAAATCTGGACTGCCCA
GCTTATCAGTCCAGACTCCAGAGTCAGACAGAGTGACTCAGCAGCATTCCGTTCAAGCAT
TTACTCATTTACTATCGCAGATTAGAGACTCCATTTGTAGGTTTTTTTCACACCCTGGCA
CATAACTGGAAGGAACATATAATGGACAATAAGCTAATTAAGGTTGGGACAAGAAAAAGT
CAGTTGGCCATGATTCAAACCAACTGGGTGGTACAAGAGTTAAAAAAGTTGCACCATGAC
CTTCGAATTGAAATCATTCAGATGAGCACAATTGGGGACAAAATTTTGGATAAATCTCTT
TCAAAGACCGGTGAGAAAAGTCTTTTTACAAAAGAACTTGAAGATGCTCTTCTTGCTCAT
AAGGTGGACCTTGTTGTAAACTCTCTGAAAGATATGCCATCTACACTGCCTACCAATTTG
ACCATATCAGCTGTATCCAAACGGGAAGATCCCCGGGATGCTGTTATCATGCACCCTACA
AACAAAGGAAAAACGCTTAAAGAATTATCTACAGGGAGTGTTGTTGGAACAAGCTCCTTG
CGTCGTATTGCTCAATTGAAGAAACTTTTTCCTCATTTGAAGTTTAAAAGCATTCGTGGT
AACCTAAACACTCGACTTCACAAGTTGGACTCTGCTGATACTTTTTCAGCAATAATATTA
GCAGTTGCTGGTGTGAAGAGAATGGGGTGGAGTGAACGAATTTCTTATATTTTACCTACA
GATCAATGCCTATATGCAATTGGTCAAGGTGCTTTGGCTATTGAGACAAGAGCTGATGAT
GCACAGAGCATAAAGTTTGTTGAGGAACTTCATGATCGTGACACTGTTATACGAACTGTG
GCTGAACGTGCCTTTTTGAAAACTTTGGGTGGGGGATGTTCAGTGCCACAGGCAGTACAT
ACATGGATTGATGATTCACAGCTTTATATGACTGGGGGAGTATTTAATCTTAATGGATCA
AGGTCGTTGATAGAAACAATGCAAACACAGCTGCCAAATCAAGAAGCAAGTGTGATTGAA
CCAGTGGATCCTGACACATGTTGTGAGTTTGCAAGCATCACTACTAGTCATAAGCTACTG
GATGCTGGTTTTCTTAAAGCCGCTGGGCATCTTGGGCGTGATCTAGCTTTGCTTCTGTTA
AAAAAGGGGGCCAGAGATATTCTGGATGAAGCAAGACAGCAAAATTTAGCAAATGAAAAT
GATGTTGTTTAGTATGCTTGTGAGTGTAAACAACACACTGAAGTTCAAAAATTTGTGATA
TTTGCCTTTTTGAACTTATAGTTTGTGCAATTAATATTTTTCCAAATTATCTCGAGGTTT
GTCAATGCTTGCTATGCAACTGAAAACATCTAACCAACCACCATGATGCTTGATTTAATT
TTTGTGTTGTGTTAATGTGGTACATTGCTGCTATCCTTACATCATACCTACATGTTTAGC
CTTTTTACTAACAAAAAGCACATGTTTTTGCACTTTTGTTACATCAGTTTGTCTATTCGA
ATGAGCTTTGTACATGTAACATTAGGACATGTGAAAGTTGGAAATATTGGCACACAAACA
ATATTGCTGGATTCTTTATTAACAATAAAATTTAAACTTGAATATGCAGTGATTAAAAAA
AAATTTTGGGGACTGTGTGAAAAGATCACAGCATACAGAGTTTAAATTATTGCACATTCA
GCTCTGCATCACTTGATTTTGTAGAATATTTTACTTTTTTCGATACTGCATTTACTTTTT
GTAGTTGGCAGACAATTTATTAAAAATGACAAAAGATACAGGTTGTGGTAAATAGCATGT
ACAAAATAAAACACACACACACTCATATATATATATATATACTCCTAGTTAAGATGAAGA
TAGCACTAGCTTGTCCTTTGCTAGACTACAAAAGTATAGACAAAAAATAAAAAAAATATA
ATAGGTAAAAGGAACATGCAAATTCTGACAGTGCCTAAGATTCTACCAGTGTATGCCATC
GACTGACAACTTTCCCCTTTGCTTCTCTCATTTCCAACCAATGTTGTTCATCAGATTCAC
TGCTGCTGTTTTGACCAAGTGAAATCCAACCAATCATGAATTTGCGTTTAATTGTGCGCG
TACAATGCACGCTTACCATAAGCGACACTTCAGCCAGCTG
| PIRSF |
HemC (IPR000860) - T[1-352] 5.8E-112 |
| PANTHER |
HemC (IPR000860) - T[2-350] 3.3E-124 |
| Hamap |
HemC (IPR000860) - T[5-335] 31.967 |
| TIGRFAM |
HemC (IPR000860) - T[6-283] 8.6E-95 |
| Pfam |
Porphobilin_deaminase_N (IPR022417) - T[6-215] 5.4E-80 |
| PRINTS |
HemC (IPR000860) - T[45-65] 7.6E-44 - T[76-95] 7.6E-44 - T[127-144] 7.6E-44 - T[146-163] 7.6E-44 - T[234-251] 7.6E-44 |
| SUPERFAMILY |
Porphobilinogen_deaminase_C_sf (IPR036803) - T[224-289] 1.24E-15 |
| Gene3D |
Porphobilinogen_deaminase_C_sf (IPR036803) - T[225-351] 4.7E-33 |
| Pfam |
Porphobilinogen_deaminase_C (IPR022418) - T[231-289] 4.3E-14 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HEM3_HUMAN | 56.857 % | 372 | 2.29E-128 |