- Transcript 'Phmamm.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S2125.g16237.01.t
Possible name(s)
ZNF100; ZNF430
Gene model
Location
S2125 [7,160 / 8,015]
Amino acid sequence
Length: 284
>Phmamm.CG.MTP2014.S2125.g16237.01.p
MLIHTNEKPHQCEICQKCFRTSNAKKQHTLVHTTEKEHQCQVCEKWFQSTDVLRSHLQVH
SDQKSYQCEICEKRFRRSGHLKYHMMLHTDEQPHQCTVCEKRFRQKGNLAIHMLNHANEL
KYQCEICEKRFNSRGQLQKHNLSHITEKMYTCSVCAMSFATSGILKQHMLTHTNERPYKC
DICEKSFVSSGNRRTHQWTHMNEKPYKCDLCEKSYATDGTLKQHRRTHFAEKRFKYEVCD
KTFAHVGSRTSHMKAAHSNATEILKISKATGIRRRKDKRKQATT
Nucleotide sequence
Length: 855
>Phmamm.CG.MTP2014.S2125.g16237.01.t
ATGTTGATCCACACCAATGAAAAACCACATCAATGTGAAATCTGCCAAAAATGCTTCCGC
ACATCTAACGCGAAAAAACAGCACACGTTAGTCCACACTACGGAAAAGGAGCATCAGTGC
CAGGTTTGTGAAAAGTGGTTTCAGTCAACTGACGTTTTAAGAAGTCATCTTCAGGTACAT
AGTGACCAGAAATCTTATCAGTGCGAAATCTGTGAAAAACGTTTCCGAAGAAGTGGTCAC
CTCAAATATCACATGATGCTACATACAGATGAGCAACCTCATCAGTGCACTGTTTGTGAG
AAGCGATTTCGTCAAAAGGGCAACCTCGCCATACATATGTTGAATCATGCTAATGAACTC
AAATATCAATGTGAAATCTGCGAAAAACGTTTTAACAGTCGTGGTCAATTGCAGAAGCAC
AATCTGTCACATATCACCGAAAAAATGTACACTTGCAGCGTATGTGCAATGTCATTTGCT
ACTTCTGGAATCCTGAAGCAGCACATGCTAACACACACCAATGAAAGACCTTACAAGTGC
GATATTTGTGAAAAAAGCTTTGTTTCATCTGGGAACCGCAGAACACACCAGTGGACACAT
ATGAATGAGAAGCCGTATAAATGCGATTTGTGTGAGAAGTCATATGCCACAGATGGTACT
TTGAAACAACATCGTCGAACTCATTTTGCCGAGAAACGATTCAAGTATGAAGTTTGTGAC
AAAACCTTTGCCCATGTTGGTTCCAGAACCAGTCACATGAAAGCTGCCCATTCCAATGCA
ACAGAAATCCTGAAAATCTCCAAGGCTACCGGAATTCGCAGACGTAAGGACAAAAGGAAA
CAAGCAACCACATAA
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[4-56] 2.21E-13 - T[60-112] 5.08E-17 - T[103-159] 1.46E-14 - T[158-215] 6.51E-21 - T[200-252] 3.16E-14 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[10-37] 11.157 - T[38-65] 11.593 - T[66-93] 14.648 - T[94-121] 10.887 - T[122-149] 12.3 - T[150-177] 13.962 - T[178-205] 13.38 - T[206-233] 13.152 |
| SMART |
Znf_C2H2_type (IPR013087) - T[10-32] 0.26 - T[38-60] 0.0071 - T[66-88] 5.5E-4 - T[94-116] 9.3E-4 - T[122-144] 1.3E-4 - T[150-172] 0.0024 - T[178-200] 0.76 - T[206-228] 0.0028 - T[234-257] 1.1 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[12-32] . - T[40-60] . - T[68-88] . - T[96-116] . - T[124-144] . - T[152-172] . - T[180-200] . - T[208-228] . |
| Pfam |
Znf_C2H2_type (IPR013087) - T[66-88] 2.7E-5 - T[94-116] 1.1E-4 - T[150-172] 0.0068 - T[178-197] 0.0086 - T[206-228] 8.9E-4 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZN431_HUMAN | 40.8 % | 199 | 8.5E-60 |
| ZN430_HUMAN | 40.8 % | 199 | 4.51E-60 |
| ZN100_HUMAN | 42 % | 201 | 9.98E-61 |
