- Transcript 'Phmamm.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S210.g05440.02.t
Possible name(s)
GPS1; PSMD6
Gene model
Location
S210 [185,908 / 189,277]
Amino acid sequence
Length: 384
>Phmamm.CG.MTP2014.S210.g05440.02.p
MPIENLEEEGLPKIPNLNIANLAFLYTLEPTEATWVELLGFVKKDNMAPYYEKICADLNK
PLDEKLLQKMKEENEKEIKKLDEKISEEVDYESDEKDALLSKAEYLCKIGAKDESLAVFR
KAYDKTIALGHRLDIIFNLIRIGLFYMDHDLITRNVDKAKQLIEEGGDWDRRNRLKVYQG
LYSIAIRDFKSAATLFLETVSTFTSYELMDYETFVTYTVYVSMMALDRPQLRDKVVKGSE
ILEILYDQTSTKQYLFSLYDCHYAQFFLRLAEVETVMKRDRYFNPHYRFYIREMRVLAYT
QLLESYRSLTLEYMAQAFGVTVEFIDHELSRFIAVGRLHCKIDKVGGVVETNRPDSKNWQ
YQETIKKGDLLLNRIQKLSRVINL
Nucleotide sequence
Length: 1,155
>Phmamm.CG.MTP2014.S210.g05440.02.t
ATGCCGATAGAAAACTTGGAAGAGGAAGGTCTTCCTAAGATTCCTAATTTAAACATTGCA
AACCTTGCGTTTCTTTATACTTTGGAGCCCACCGAAGCAACATGGGTTGAATTATTGGGA
TTTGTAAAGAAAGACAACATGGCCCCTTATTATGAGAAAATTTGTGCGGATTTAAACAAG
CCTCTTGATGAAAAACTGCTTCAAAAAATGAAGGAGGAAAATGAGAAAGAAATTAAAAAA
CTAGATGAGAAAATTTCGGAGGAAGTTGATTATGAATCTGACGAAAAAGATGCACTTCTT
TCCAAGGCAGAATATCTCTGTAAGATTGGTGCTAAGGATGAAAGTCTGGCTGTTTTTCGA
AAAGCCTATGACAAAACAATTGCGCTTGGTCATAGATTGGACATCATTTTCAACCTTATA
CGAATTGGTTTGTTTTATATGGACCATGACTTAATCACAAGAAATGTAGACAAAGCAAAA
CAGTTAATTGAAGAAGGTGGTGACTGGGACAGAAGAAACAGATTAAAAGTCTATCAGGGC
TTATACTCAATTGCTATCAGAGATTTTAAATCTGCAGCTACCTTGTTTCTTGAAACGGTT
TCCACTTTTACTTCTTATGAATTAATGGACTATGAGACTTTTGTCACATACACAGTTTAT
GTTTCAATGATGGCTCTGGATCGACCACAATTAAGAGATAAAGTTGTAAAGGGTTCTGAA
ATTCTTGAGATTCTTTATGATCAGACAAGCACAAAACAATATCTGTTTTCCCTGTATGAT
TGCCATTATGCTCAGTTTTTTCTCAGACTTGCTGAAGTGGAAACAGTAATGAAGAGAGAT
CGTTATTTTAACCCACATTATCGTTTCTACATCAGAGAAATGAGAGTTTTGGCATACACC
CAGCTTCTTGAGTCGTACAGAAGTTTAACACTTGAGTACATGGCACAAGCCTTTGGTGTC
ACTGTAGAATTTATTGACCATGAATTGTCACGATTTATTGCTGTTGGACGACTGCATTGC
AAGATTGACAAAGTTGGTGGAGTGGTAGAAACCAATCGCCCCGACAGCAAAAATTGGCAA
TACCAGGAAACTATCAAAAAAGGAGATCTGCTGCTAAACAGGATCCAGAAACTGTCCAGA
GTTATTAATTTATAA
| PANTHER |
PSMD6 (IPR035268) - T[6-384] 1.9E-173 |
| Pfam |
Rpn7/CSN1 (IPR019585) - T[63-234] 1.1E-54 |
| SUPERFAMILY |
TPR-like_helical_dom_sf (IPR011990) - T[85-209] 1.9E-5 |
| ProSiteProfiles |
PCI_dom (IPR000717) - T[188-356] 22.814 |
| Pfam |
PCI_dom (IPR000717) - T[252-352] 1.8E-14 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[280-361] 4.62E-18 |
| SMART |
PCI_dom (IPR000717) - T[285-368] 1.7E-23 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CSN1_HUMAN | 23.048 % | 86.7 | 1.71E-18 |
| PSMD6_HUMAN | 69.409 % | 553 | 0 |