- Transcript 'Phmamm.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S210.g05436.02.t
Possible name(s)
ASCL1; ASCL4; ASCL5
Gene model
Location
S210 [166,643 / 168,386]
Amino acid sequence
Length: 458
>Phmamm.CG.MTP2014.S210.g05436.02.p
MASLHASASEQNMFQVAYDKTWKAQECTNKQQSNGALTTYTLHIKNDSITATPEPLTEVR
RGGGVAGKNPSSVARRNARERRRIRNVNSAFDELRQHVPNGERNRKKISKVDTLQSAIEY
IKALEELVQNRRSKTTAAAEAEASKENAPKLNKCTKRNEQSPSPPDTPEHRNNGSDCDDV
IFVKELSNFAESPAPNNEQKSAMESSGKKVQRPAALTESMLKAFDVMLQKCASERKASAS
RPDGFSELFEDQGDTSSESSFRPRQSSLELDQSPPSMDFVASPIHSETLQATVAETSVGG
FLQQLEDFTPSFEQINTPNSQVSTFEDAQLPDEWQKPLGRFQQFYPEAIAENCPAPQINY
LPLPASNANWPNGVQEMEHQNFHEPFDVQTVSVPSGLDQINPTLDFFPGPDSNNNYSFVE
TAPTFMNMNANQGCEQPTFSQSLFSARGVDESFAVAQW
Nucleotide sequence
Length: 1,377
>Phmamm.CG.MTP2014.S210.g05436.02.t
ATGGCGTCACTCCACGCATCTGCCAGTGAACAGAACATGTTTCAAGTTGCCTACGATAAA
ACATGGAAGGCTCAAGAGTGCACAAACAAACAGCAAAGCAACGGTGCGCTGACCACCTAC
ACTCTGCACATTAAGAACGATTCGATCACAGCCACCCCGGAACCACTGACAGAGGTCCGC
CGAGGGGGCGGTGTCGCAGGGAAAAATCCTTCCAGCGTTGCCAGACGGAATGCCCGCGAA
CGCCGGCGAATTCGAAACGTGAACAGCGCCTTCGATGAACTTCGGCAACATGTGCCGAAC
GGCGAACGGAACCGCAAAAAGATTAGCAAGGTAGACACGTTGCAGTCCGCGATTGAATAC
ATCAAAGCGCTGGAAGAACTTGTCCAAAACCGACGCTCAAAAACAACAGCCGCAGCTGAA
GCCGAAGCCAGCAAGGAAAACGCGCCAAAGCTGAACAAATGCACCAAGCGAAACGAACAA
TCGCCATCGCCCCCTGACACACCTGAACACCGGAATAATGGCTCCGATTGCGATGACGTT
ATTTTTGTAAAAGAACTCAGCAATTTTGCCGAATCCCCAGCGCCAAACAATGAGCAAAAA
TCGGCAATGGAAAGCAGTGGTAAAAAGGTTCAACGCCCAGCAGCACTCACCGAATCCATG
CTTAAAGCTTTCGACGTTATGCTTCAAAAGTGTGCTTCCGAGAGAAAGGCGTCTGCTTCG
CGTCCCGACGGTTTTTCCGAGCTTTTCGAAGACCAGGGCGATACCAGCAGCGAAAGCTCT
TTTCGGCCTCGCCAGTCTTCCTTAGAACTAGATCAAAGCCCACCTAGCATGGATTTTGTT
GCGTCACCAATTCACAGTGAAACTTTACAAGCAACCGTTGCTGAAACATCAGTTGGAGGG
TTCTTGCAGCAACTTGAAGATTTCACGCCGTCGTTTGAACAAATCAACACACCAAACAGC
CAAGTATCAACATTTGAGGACGCTCAGTTACCCGACGAATGGCAAAAGCCTTTAGGCCGA
TTTCAGCAGTTTTATCCTGAAGCCATTGCTGAAAATTGCCCAGCACCACAGATAAACTAC
TTACCGTTGCCCGCAAGCAATGCTAACTGGCCAAACGGCGTACAGGAAATGGAACATCAA
AATTTTCATGAACCCTTTGATGTTCAAACCGTATCCGTGCCGAGTGGCCTTGACCAAATC
AATCCAACTCTGGACTTTTTTCCCGGTCCTGACAGCAACAACAACTATTCCTTTGTTGAG
ACTGCACCAACATTTATGAACATGAACGCCAACCAAGGCTGCGAACAACCGACATTCAGC
CAATCGCTTTTCTCCGCTCGAGGAGTGGATGAGAGTTTTGCTGTCGCGCAGTGGTAA
| PANTHER |
MASH1/Ascl1a-like (IPR015660) - T[68-250] 8.7E-25 |
| ProSiteProfiles |
bHLH_dom (IPR011598) - T[71-124] 16.596 |
| Gene3D |
HLH_DNA-bd_sf (IPR036638) - T[74-130] 1.2E-20 |
| Pfam |
bHLH_dom (IPR011598) - T[74-125] 7.9E-18 |
| SUPERFAMILY |
HLH_DNA-bd_sf (IPR036638) - T[75-134] 8.37E-17 |
| SMART |
bHLH_dom (IPR011598) - T[77-130] 8.5E-18 |
| CDD |
bHLH_dom (IPR011598) - T[87-129] 3.12391E-12 |
| Protein Name | Identity | Bit Score | e-value |
|---|