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TRANSCRIPT CARD

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  1. Transcript 'Boschl.CG.Botznik201...' > 
  2. Transcript 'KH2012:KH.C2.643.v1....' > 
  3. Transcript 'Phmamm.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S20.g00859.02.t

Possible name(s)

CNOT7; CNOT8

Gene model

Phmamm.CG.MTP2014.S20.g00859

Location

S20 [304,895 / 307,334]

Sequences

Amino acid sequence

Length: 280

>Phmamm.CG.MTP2014.S20.g00859.02.p
MPAQQTDDPITEVWSTNIEAEFKKIRKIVKQYNYIAMDTEFPGVVARPIGEFRTNSDYQY
QLLRCNVDMLKIIQLGLTFMNESGETPTGVSTWQFNFKFNLNEDMYAQDSIELLQESGIQ
FKKHEAEGIEPLYFAELLMTSGVVLMDNVHWVSFHSGYDFGYLLKLLTNNNLATDESTFF
ELLKLFFPTIFDVKYLMRSCKALKGGLQEVAEQLEVKRVGSQHQAGSDSLLTGLTFFKLK
EKFFDNDSDISKHSGHLYGLGSSYIQNGNPYSAEEYNKNS

Nucleotide sequence

Length: 843

>Phmamm.CG.MTP2014.S20.g00859.02.t
ATGCCTGCTCAACAAACAGATGATCCAATAACAGAAGTATGGTCAACTAACATAGAGGCA
GAATTCAAGAAAATTAGAAAAATTGTCAAGCAATATAACTACATTGCTATGGATACGGAG
TTTCCTGGAGTTGTGGCTCGGCCAATTGGAGAGTTCCGGACTAATTCAGACTATCAGTAC
CAGCTTTTGCGATGCAATGTTGACATGCTAAAGATCATACAACTGGGCCTCACTTTTATG
AATGAAAGTGGTGAAACCCCCACTGGTGTATCAACTTGGCAGTTCAACTTTAAATTTAAC
TTGAATGAAGACATGTATGCTCAAGATTCAATTGAGTTGCTTCAGGAATCTGGGATTCAG
TTTAAAAAGCATGAAGCGGAAGGAATAGAACCCTTGTATTTTGCTGAGCTGTTAATGACA
TCTGGAGTTGTTTTAATGGATAATGTTCACTGGGTTTCGTTTCACAGTGGATATGATTTT
GGGTATTTGCTAAAACTGCTTACAAATAACAACCTGGCAACTGATGAATCAACATTTTTT
GAGTTACTCAAGCTTTTCTTTCCTACTATATTTGATGTCAAGTATCTGATGAGAAGCTGC
AAAGCACTAAAGGGAGGTCTGCAAGAGGTGGCTGAACAGTTGGAAGTAAAAAGAGTTGGA
TCACAACATCAGGCTGGCAGTGATAGCCTTCTGACTGGATTAACCTTCTTCAAACTAAAA
GAAAAGTTCTTCGACAATGACAGTGATATATCCAAACATTCTGGCCATTTATATGGATTG
GGCAGTTCTTACATACAAAATGGAAATCCATATAGTGCAGAGGAGTACAACAAAAATTCC
TGA

InterProScan

Gene3D
RNaseH_sf (IPR036397) - T[9-260] 2.7E-119
SUPERFAMILY
RNaseH-like_sf (IPR012337) - T[9-260] 6.33E-93
Pfam
RNase_CAF1 (IPR006941) - T[13-130] 1.3E-11 - T[152-236] 2.7E-7

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CNOT7_HUMAN 72.378 % 429 1.1E-153
CNOT8_HUMAN 67.897 % 399 2.62E-141