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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S5...' > 
  2. Transcript 'Boleac.CG.SB_v3.S150...' > 
  3. Transcript 'KH2012:KH.L18.89.v2....' > 
  4. Transcript 'Boschl.CG.Botznik201...' > 
  5. Transcript 'Phmamm.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S209.g05406.03.t

Possible name(s)

RIC1

Gene model

Phmamm.CG.MTP2014.S209.g05406

Location

S209 [91,819 / 105,048]

Sequences

Amino acid sequence

Length: 1,232

>Phmamm.CG.MTP2014.S209.g05406.03.p
SLSCVQDELLVALMDGRLEILSWSHATDQRKSVALCDIPFSMDMHLSGTLIRARNVCPIQ
AVYSPFLEGFALVLSDGRAALVAMTQSSSDNTDEEDDVKEGGWKTRGIWAPGMVNATCVA
VNNKYRLLAFGTSIGDCCVYAIDDVTGSLTLSHTISLSPTQYPNICKSVGAVLKMEWSPD
GSALALSWLHGGVSVWSVFGSCLFCTLASDRSHSSDGTPYIQGVFRSMCWGVEGYTLWLI
GSNNATGSSHGLSKSVNHEGTPEDKPQKSLDPKSHVQDKVKHNHKKARRKLVTENGNGVA
EPASKINIEVGQLLQIQFAKSALAMNPCMSNHCHVLMHSEDKIYLSLGERPQTYSFINPD
TSDKSHFARRDSSIFPTYSDIPNSPKAKKLGSPKHGSPRRKSVPASNEQFMNQMHQPQPS
VENLTNPNETTTDGAPENNASLGSAVANKQWTIIQFPLNYLPSNWPIRFAAVDETGCFLA
IAGNFGLAHYTVTSRKWKVFGNIMQEKDMVVTGGLTWWQDYVVVACFNLSENQDEIRLYP
RLTNLDNAFACIKKVRSQILLVNIFQNLLILFTYDCRICVFVLSNDPKNPRSHASVRFLQ
EVSMARYVPYPTLVASVTLTALHMESAVRRSSSSTSFCRPQRETEVLIINVAGRLLLLQG
SSEEEEPGGPPSPQEDQLSPLPHERRQTRFTAPVVLASCVENIWTTQHKNRAKVHLTDAL
WLGCGGAGVRVWLPLFPPRPNRHNSADGGGHRGFELQLLTARRITLAFSLDSCYPLAVLF
NEAVVLGVTSETLQGFDENLTSKRMSERNTALQFSTIERTCEIYLHQILRQLLRRNLGYH
ALQLASTCQNLSCFSHVLELMLHEVLEEEATASEPIPDPLLPTVIKFLEEFPQYLETVVH
CARKTEIALWEYLFNSVGSPRELFEECLENGQLRTAASYLIILQNLEQLAVARQDATQLF
DLALQKRQWALANEIARFLRAIGDGDACATPRHPTLLNVNIYPAVTPGSHHNTPTEPADP
TFKFSGGKTQPSNPSSPDDNPPVSAAPPSRRLTARSYTESYFDILPNTKTSSAQTTVTSP
GGQSSTGTSISHPYVSRYQMRQYHQEHYPMHRPLQHSTSHPISNSSSRSKRFSGDKDTSK
EHVAAECAEHYFLDVILARQARKMMSDHRLHDLGTFAACVNFQLVPWLRKERGRACRVDD
AVLCLKTLHSDFSWPYPSFFSSKPTRGSNSSG

Nucleotide sequence

Length: 3,699

>Phmamm.CG.MTP2014.S209.g05406.03.t
ACAGTTTGTCATGTGTACAAGATGAACTGTTAGTTGCATTAATGGATGGACGACTTGAAA
TTCTGTCTTGGTCACATGCAACTGATCAAAGAAAATCAGTTGCACTTTGTGACATTCCTT
TTTCGATGGATATGCATTTGTCTGGCACACTTATACGAGCAAGAAATGTTTGTCCTATCC
AAGCTGTGTATAGTCCATTCCTGGAGGGCTTTGCATTGGTGTTAAGTGATGGTAGGGCAG
CTCTTGTTGCCATGACACAGTCAAGCAGTGATAATACTGACGAGGAAGATGATGTGAAAG
AAGGTGGTTGGAAAACACGAGGAATTTGGGCCCCTGGGATGGTGAATGCAACATGTGTAG
CTGTAAACAACAAATACAGACTACTTGCCTTTGGAACAAGCATTGGTGATTGCTGTGTTT
ATGCAATCGATGATGTTACTGGGAGTCTGACATTATCACACACTATCTCACTGTCACCAA
CACAATATCCAAATATTTGCAAATCTGTTGGTGCAGTGTTAAAAATGGAGTGGTCACCAG
ATGGCAGTGCATTGGCTTTGTCATGGTTACATGGTGGTGTGTCAGTGTGGAGTGTGTTTG
GGTCATGCCTCTTTTGCACACTTGCTTCTGATAGATCCCATTCTTCTGATGGTACACCCT
ACATACAGGGTGTTTTCAGATCTATGTGTTGGGGAGTGGAAGGATACACGCTGTGGCTGA
TTGGAAGCAACAATGCGACGGGCAGCTCCCATGGCCTATCCAAGTCAGTCAACCACGAAG
GCACGCCTGAGGACAAGCCACAAAAATCCCTCGATCCGAAATCCCATGTGCAAGACAAAG
TTAAACACAACCATAAAAAGGCCAGAAGGAAGTTGGTGACTGAAAATGGAAATGGTGTTG
CTGAACCTGCATCAAAAATAAACATTGAAGTTGGACAATTGCTTCAAATACAATTTGCCA
AAAGTGCTCTTGCTATGAATCCTTGCATGAGCAACCATTGTCATGTGCTAATGCATAGCG
AAGACAAAATATACCTCAGTTTGGGAGAAAGGCCTCAAACTTACTCTTTTATCAACCCTG
ACACATCAGATAAGTCACATTTTGCACGGCGGGACTCTAGTATCTTTCCAACATACTCGG
ACATTCCAAATTCACCCAAAGCAAAAAAGCTTGGGTCTCCCAAACATGGCTCACCAAGGA
GAAAGTCCGTCCCTGCAAGCAATGAACAATTTATGAACCAAATGCATCAGCCACAACCCA
GTGTTGAAAACCTAACAAATCCAAATGAAACAACTACTGACGGTGCACCGGAAAACAATG
CAAGTCTTGGTTCAGCTGTTGCTAATAAGCAGTGGACAATTATACAATTTCCACTCAACT
ACTTGCCCAGCAACTGGCCAATCAGGTTTGCTGCTGTTGATGAAACTGGCTGCTTTCTTG
CGATTGCTGGAAACTTTGGCTTAGCTCATTATACAGTGACCTCAAGAAAGTGGAAAGTAT
TTGGAAACATCATGCAAGAAAAAGATATGGTGGTAACAGGTGGATTGACCTGGTGGCAGG
ATTATGTGGTAGTTGCATGTTTCAATTTATCGGAGAATCAAGATGAAATTCGACTCTATC
CCAGACTTACGAACCTTGACAATGCATTTGCCTGCATCAAGAAAGTTCGTTCACAGATTT
TGTTGGTCAACATCTTCCAGAATCTTCTCATTCTTTTTACTTACGATTGCCGAATATGTG
TCTTTGTTCTTTCCAACGATCCGAAAAACCCACGGTCGCATGCGTCTGTTCGTTTTCTGC
AAGAAGTATCAATGGCGCGCTACGTCCCATATCCCACACTTGTAGCATCTGTGACACTCA
CTGCCTTGCACATGGAGAGCGCTGTGCGAAGATCTTCGTCGTCAACTTCTTTCTGTCGGC
CGCAGCGAGAGACTGAAGTTCTCATCATAAACGTTGCAGGTCGTCTTCTGCTTCTTCAGG
GATCATCTGAAGAGGAGGAACCCGGCGGACCTCCATCCCCGCAAGAAGACCAGTTATCAC
CTCTTCCCCATGAACGGAGGCAGACACGTTTTACTGCACCCGTAGTGCTTGCCTCGTGTG
TGGAAAATATATGGACAACTCAGCATAAAAACAGGGCCAAAGTACATCTAACCGATGCCC
TGTGGCTTGGCTGTGGCGGTGCAGGCGTAAGAGTCTGGCTTCCACTATTTCCTCCGCGTC
CTAACAGGCACAACAGCGCCGATGGTGGCGGTCACCGTGGGTTTGAATTACAACTACTGA
CTGCACGTCGCATCACCCTGGCCTTTTCGCTTGATTCTTGTTACCCACTCGCTGTGCTTT
TCAATGAAGCCGTAGTGCTGGGAGTCACGTCTGAAACGTTGCAAGGTTTCGACGAAAACC
TGACAAGTAAGCGGATGAGCGAAAGAAACACTGCGCTTCAATTTTCCACCATCGAACGAA
CCTGCGAGATTTACCTTCACCAGATTCTCCGTCAGTTGTTACGAAGGAATCTTGGTTACC
ACGCACTACAACTCGCGTCCACATGCCAAAACCTCTCCTGCTTTTCGCACGTCCTTGAAC
TCATGCTGCACGAGGTTTTGGAAGAGGAAGCCACAGCATCGGAGCCCATCCCTGACCCTC
TTCTTCCAACCGTGATCAAGTTCCTCGAAGAATTTCCACAGTACCTGGAGACTGTAGTTC
ACTGTGCGCGAAAGACCGAGATTGCATTGTGGGAATATTTGTTCAACTCAGTGGGGAGTC
CCCGAGAGTTATTCGAGGAATGTTTAGAAAACGGGCAGCTCCGTACAGCGGCGTCTTACC
TCATCATATTACAAAACCTCGAACAACTTGCAGTAGCACGACAAGACGCTACACAATTAT
TCGACCTTGCGCTACAGAAACGGCAATGGGCGCTTGCTAACGAGATAGCAAGGTTTCTCA
GAGCAATCGGAGATGGGGATGCTTGCGCTACCCCACGTCATCCAACCCTCCTAAACGTAA
ATATTTACCCCGCAGTCACCCCTGGGTCTCATCACAACACCCCCACCGAACCTGCTGACC
CCACATTTAAGTTCAGCGGAGGAAAAACACAACCGAGCAATCCGAGTTCGCCAGACGACA
ACCCACCCGTCTCCGCGGCGCCACCTAGCAGAAGATTGACTGCGCGCAGCTATACAGAAT
CCTACTTCGATATTCTGCCCAACACCAAAACGTCATCCGCCCAAACGACCGTGACGTCAC
CTGGGGGTCAGAGTTCAACCGGCACGTCGATTTCACATCCTTATGTGTCGAGATATCAGA
TGCGTCAGTATCATCAGGAGCATTATCCCATGCACAGACCTCTCCAACACTCAACAAGTC
ACCCGATTTCTAATTCGAGCAGTCGATCAAAAAGATTTTCTGGTGACAAAGACACGAGCA
AGGAACACGTTGCAGCGGAATGCGCCGAACATTATTTCTTGGACGTTATTTTAGCCAGAC
AGGCACGTAAGATGATGAGCGATCATCGACTTCACGATCTTGGAACATTTGCAGCTTGTG
TCAACTTTCAACTTGTACCATGGCTCCGTAAAGAACGCGGCAGAGCCTGCAGGGTTGATG
ACGCAGTTTTGTGCCTGAAAACGTTGCATTCCGATTTTTCCTGGCCCTACCCGAGCTTTT
TCTCAAGCAAACCAACTCGTGGTAGCAACAGTAGTGGTA

InterProScan

SUPERFAMILY
Quino_amine_DH_bsu (IPR011044) - T[115-524] 1.88E-8
Pfam
Ribosome_control_1 (IPR009771) - T[716-984] 3.7E-84

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RIC1_HUMAN 38.625 % 787 0