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TRANSCRIPT CARD

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  1. Transcript 'Moocul.CG.ELv1_2.S26...' > 
  2. Transcript 'Phmamm.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S209.g05406.02.t

Possible name(s)

RIC1

Gene model

Phmamm.CG.MTP2014.S209.g05406

Location

S209 [91,819 / 105,048]

Sequences

Amino acid sequence

Length: 1,281

>Phmamm.CG.MTP2014.S209.g05406.02.p
SLSCVQDELLVALMDGRLEILSWSHATDQRKSVALCDIPFSMDMHLSGTLIRARNVCPIQ
AVYSPFLEGFALVLSDGRAALVAMTQSSSDNTDEEDDVKEGGWKTRGIWAPGMVNATCVA
VNNKYRLLAFGTSIGDCCVYAIDDVTGSLTLSHTISLSPTQYPNICKSVGAVLKMEWSPD
GSALALSWLHGGVSVWSVFGSCLFCTLASDRSHSSDGTPYIQGVFRSMCWGVEGYTLWLI
GSNNATGSSHGLSKSVNHEGTPEDKPQKSLDPKSHVQDKVKHNHKKARRKLVTENGNGVA
EPASKINIEVGQLLQIQFAKSALAMNPCMSNHCHVLMHSEDKIYLSLGERPQTYSFINPD
TSDKSHFARRDSSIFPTYSDIPNSPKAKKLGSPKHGSPRRKSVPASNEQFMNQMHQPQPS
VENLTNPNETTTDGAPENNASLGSAVANKQWTIIQFPLNYLPSNWPIRFAAVDETGCFLA
IAGNFGLAHYTVTSRKWKVFGNIMQEKDMVVTGGLTWWQDYVVVACFNLSENQDEIRLYP
RLTNLDNAFACIKKVRSQILLVNIFQNLLILFTYDCRICVFVLSNDPKNPRSHASVRFLQ
EVSMARYVPYPTLVASVTLTALHMESAVRRSSSSTSFCRPQRETEVLIINVAGRLLLLQG
SSEEEEPGGPPSPQEDQLSPLPHERRQTRFTAPVVLASCVENIWTTQHKNRAKVHLTDAL
WLGCGGAGVRVWLPLFPPRPNRHNSADGGGHRGFELQLLTARRITLAFSLDSCYPLAVLF
NEAVVLGVTSETLQGFDENLTSKRMSERNTALQFSTIERTCEIYLHQILRQLLRRNLGYH
ALQLASTCQNLSCFSHVLELMLHEVLEEEATASEPIPDPLLPTVIKFLEEFPQYLETVVH
CARKTEIALWEYLFNSVGSPRELFEECLENGQLRTAASYLIILQNLEQLAVARQDATQLF
DLALQKRQWALANEIARFLRAIGDGDACATPRHPTLLNVNIYPAVTPGSHHNTPTEPADP
TFKFSDERKNLLTRQYSVVPVYETVSNTQKQRRLSTKSAPPTPAPQTTTFQGCSGGKTQP
SNPSSPDDNPPVSAAPPSRRLTARSYTESYFDILPNTKTSSAQTTVTSPGGQSSTGTSIS
HPYVSRYQMRQYHQEHYPMHRPLQHSTSHPISNSSSRSKRFSGDKDTSKEHVAAECAEHY
FLDVILARQARKMMSDHRLHDLGTFAACVNFQLVPWLRKERGRACRVDDAVLCLKTLHSD
FSWPYPSFFSSKPTRGSNSSG

Nucleotide sequence

Length: 3,846

>Phmamm.CG.MTP2014.S209.g05406.02.t
ACAGTTTGTCATGTGTACAAGATGAACTGTTAGTTGCATTAATGGATGGACGACTTGAAA
TTCTGTCTTGGTCACATGCAACTGATCAAAGAAAATCAGTTGCACTTTGTGACATTCCTT
TTTCGATGGATATGCATTTGTCTGGCACACTTATACGAGCAAGAAATGTTTGTCCTATCC
AAGCTGTGTATAGTCCATTCCTGGAGGGCTTTGCATTGGTGTTAAGTGATGGTAGGGCAG
CTCTTGTTGCCATGACACAGTCAAGCAGTGATAATACTGACGAGGAAGATGATGTGAAAG
AAGGTGGTTGGAAAACACGAGGAATTTGGGCCCCTGGGATGGTGAATGCAACATGTGTAG
CTGTAAACAACAAATACAGACTACTTGCCTTTGGAACAAGCATTGGTGATTGCTGTGTTT
ATGCAATCGATGATGTTACTGGGAGTCTGACATTATCACACACTATCTCACTGTCACCAA
CACAATATCCAAATATTTGCAAATCTGTTGGTGCAGTGTTAAAAATGGAGTGGTCACCAG
ATGGCAGTGCATTGGCTTTGTCATGGTTACATGGTGGTGTGTCAGTGTGGAGTGTGTTTG
GGTCATGCCTCTTTTGCACACTTGCTTCTGATAGATCCCATTCTTCTGATGGTACACCCT
ACATACAGGGTGTTTTCAGATCTATGTGTTGGGGAGTGGAAGGATACACGCTGTGGCTGA
TTGGAAGCAACAATGCGACGGGCAGCTCCCATGGCCTATCCAAGTCAGTCAACCACGAAG
GCACGCCTGAGGACAAGCCACAAAAATCCCTCGATCCGAAATCCCATGTGCAAGACAAAG
TTAAACACAACCATAAAAAGGCCAGAAGGAAGTTGGTGACTGAAAATGGAAATGGTGTTG
CTGAACCTGCATCAAAAATAAACATTGAAGTTGGACAATTGCTTCAAATACAATTTGCCA
AAAGTGCTCTTGCTATGAATCCTTGCATGAGCAACCATTGTCATGTGCTAATGCATAGCG
AAGACAAAATATACCTCAGTTTGGGAGAAAGGCCTCAAACTTACTCTTTTATCAACCCTG
ACACATCAGATAAGTCACATTTTGCACGGCGGGACTCTAGTATCTTTCCAACATACTCGG
ACATTCCAAATTCACCCAAAGCAAAAAAGCTTGGGTCTCCCAAACATGGCTCACCAAGGA
GAAAGTCCGTCCCTGCAAGCAATGAACAATTTATGAACCAAATGCATCAGCCACAACCCA
GTGTTGAAAACCTAACAAATCCAAATGAAACAACTACTGACGGTGCACCGGAAAACAATG
CAAGTCTTGGTTCAGCTGTTGCTAATAAGCAGTGGACAATTATACAATTTCCACTCAACT
ACTTGCCCAGCAACTGGCCAATCAGGTTTGCTGCTGTTGATGAAACTGGCTGCTTTCTTG
CGATTGCTGGAAACTTTGGCTTAGCTCATTATACAGTGACCTCAAGAAAGTGGAAAGTAT
TTGGAAACATCATGCAAGAAAAAGATATGGTGGTAACAGGTGGATTGACCTGGTGGCAGG
ATTATGTGGTAGTTGCATGTTTCAATTTATCGGAGAATCAAGATGAAATTCGACTCTATC
CCAGACTTACGAACCTTGACAATGCATTTGCCTGCATCAAGAAAGTTCGTTCACAGATTT
TGTTGGTCAACATCTTCCAGAATCTTCTCATTCTTTTTACTTACGATTGCCGAATATGTG
TCTTTGTTCTTTCCAACGATCCGAAAAACCCACGGTCGCATGCGTCTGTTCGTTTTCTGC
AAGAAGTATCAATGGCGCGCTACGTCCCATATCCCACACTTGTAGCATCTGTGACACTCA
CTGCCTTGCACATGGAGAGCGCTGTGCGAAGATCTTCGTCGTCAACTTCTTTCTGTCGGC
CGCAGCGAGAGACTGAAGTTCTCATCATAAACGTTGCAGGTCGTCTTCTGCTTCTTCAGG
GATCATCTGAAGAGGAGGAACCCGGCGGACCTCCATCCCCGCAAGAAGACCAGTTATCAC
CTCTTCCCCATGAACGGAGGCAGACACGTTTTACTGCACCCGTAGTGCTTGCCTCGTGTG
TGGAAAATATATGGACAACTCAGCATAAAAACAGGGCCAAAGTACATCTAACCGATGCCC
TGTGGCTTGGCTGTGGCGGTGCAGGCGTAAGAGTCTGGCTTCCACTATTTCCTCCGCGTC
CTAACAGGCACAACAGCGCCGATGGTGGCGGTCACCGTGGGTTTGAATTACAACTACTGA
CTGCACGTCGCATCACCCTGGCCTTTTCGCTTGATTCTTGTTACCCACTCGCTGTGCTTT
TCAATGAAGCCGTAGTGCTGGGAGTCACGTCTGAAACGTTGCAAGGTTTCGACGAAAACC
TGACAAGTAAGCGGATGAGCGAAAGAAACACTGCGCTTCAATTTTCCACCATCGAACGAA
CCTGCGAGATTTACCTTCACCAGATTCTCCGTCAGTTGTTACGAAGGAATCTTGGTTACC
ACGCACTACAACTCGCGTCCACATGCCAAAACCTCTCCTGCTTTTCGCACGTCCTTGAAC
TCATGCTGCACGAGGTTTTGGAAGAGGAAGCCACAGCATCGGAGCCCATCCCTGACCCTC
TTCTTCCAACCGTGATCAAGTTCCTCGAAGAATTTCCACAGTACCTGGAGACTGTAGTTC
ACTGTGCGCGAAAGACCGAGATTGCATTGTGGGAATATTTGTTCAACTCAGTGGGGAGTC
CCCGAGAGTTATTCGAGGAATGTTTAGAAAACGGGCAGCTCCGTACAGCGGCGTCTTACC
TCATCATATTACAAAACCTCGAACAACTTGCAGTAGCACGACAAGACGCTACACAATTAT
TCGACCTTGCGCTACAGAAACGGCAATGGGCGCTTGCTAACGAGATAGCAAGGTTTCTCA
GAGCAATCGGAGATGGGGATGCTTGCGCTACCCCACGTCATCCAACCCTCCTAAACGTAA
ATATTTACCCCGCAGTCACCCCTGGGTCTCATCACAACACCCCCACCGAACCTGCTGACC
CCACATTTAAGTTCAGCGACGAGCGCAAGAATTTGCTGACGCGGCAATACAGCGTGGTGC
CCGTATACGAGACGGTCAGCAATACCCAGAAACAACGGCGCCTGTCGACCAAAAGCGCCC
CACCCACCCCTGCACCGCAGACCACCACCTTCCAGGGTTGTAGCGGAGGAAAAACACAAC
CGAGCAATCCGAGTTCGCCAGACGACAACCCACCCGTCTCCGCGGCGCCACCTAGCAGAA
GATTGACTGCGCGCAGCTATACAGAATCCTACTTCGATATTCTGCCCAACACCAAAACGT
CATCCGCCCAAACGACCGTGACGTCACCTGGGGGTCAGAGTTCAACCGGCACGTCGATTT
CACATCCTTATGTGTCGAGATATCAGATGCGTCAGTATCATCAGGAGCATTATCCCATGC
ACAGACCTCTCCAACACTCAACAAGTCACCCGATTTCTAATTCGAGCAGTCGATCAAAAA
GATTTTCTGGTGACAAAGACACGAGCAAGGAACACGTTGCAGCGGAATGCGCCGAACATT
ATTTCTTGGACGTTATTTTAGCCAGACAGGCACGTAAGATGATGAGCGATCATCGACTTC
ACGATCTTGGAACATTTGCAGCTTGTGTCAACTTTCAACTTGTACCATGGCTCCGTAAAG
AACGCGGCAGAGCCTGCAGGGTTGATGACGCAGTTTTGTGCCTGAAAACGTTGCATTCCG
ATTTTTCCTGGCCCTACCCGAGCTTTTTCTCAAGCAAACCAACTCGTGGTAGCAACAGTA
GTGGTA

InterProScan

SUPERFAMILY
Quino_amine_DH_bsu (IPR011044) - T[115-514] 3.06E-8
Pfam
Ribosome_control_1 (IPR009771) - T[716-984] 3.9E-84

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RIC1_HUMAN 41.9 % 742 0