- Transcript 'Moocci.CG.ELv1_2.S49...' >
- Transcript 'Harore.CG.MTP2014.S3...' >
- Transcript 'Haaura.CG.MTP2014.S1...' >
- Molecular Tool 'ciad20f14-MO (Hamada's MO)' >
- Transcript 'Phmamm.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S2087.g16169.02.t
Possible name(s)
PBX1; PBX2; PBX4
Gene model
Location
S2087 [8,315 / 13,111]
Amino acid sequence
Length: 379
>Phmamm.CG.MTP2014.S2087.g16169.02.p
MTGPMHGGGDYNTNSSGGPSTVELENRSNNDGILNVTRKQDISDVLQQIMTITDQSLDEA
QARKHALNVHRMKGALFQVLCEIKEKSVLNMRSPPEDEPPDPQQLRLDRMLESEACNEFT
SHVMNLLREQSRTRPISNKEIERMITIITKKFNNIQLQLKQSTCEAVMILRSRFLDARRK
RRNFSKQATEVLNEYFYSHLSNPYPSEEAKEELARKCTITVSQVSNWFGNKRIRYKKNIG
KFQEEANLYAAKTAQAAVSAAQQACVQQDGISGTPPDQDSNQTLMEGSPDTGSDTPTSGQ
NYSSPSQRAYGQQGEMFIGVNGDRFANQQQNVGFGGERNALGGQANIYSPQNGVWSRQDT
SGGSAQNVTSPASQSDSVD
Nucleotide sequence
Length: 1,140
>Phmamm.CG.MTP2014.S2087.g16169.02.t
ATGACTGGACCAATGCATGGTGGTGGTGACTACAACACTAATAGTTCTGGAGGTCCCAGC
ACTGTAGAGTTGGAAAACAGAAGCAACAATGATGGTATATTGAATGTGACTAGAAAACAA
GACATCAGTGATGTTTTGCAACAAATCATGACCATAACAGACCAAAGCTTGGATGAGGCG
CAAGCCAGAAAACATGCACTTAATGTTCATCGAATGAAAGGAGCTTTGTTTCAAGTCTTA
TGTGAAATCAAAGAAAAGTCAGTTTTAAATATGCGATCTCCTCCTGAAGATGAACCACCT
GACCCACAGCAGCTTCGTCTGGATAGAATGCTTGAATCAGAGGCATGTAATGAGTTCACT
AGCCATGTCATGAACCTTTTACGAGAACAAAGTCGTACAAGGCCAATTTCCAACAAAGAA
ATTGAAAGAATGATAACAATAATTACCAAAAAGTTTAACAACATCCAACTTCAGCTAAAG
CAAAGCACTTGTGAAGCAGTTATGATACTCAGATCCCGTTTTTTGGATGCTAGACGAAAA
AGACGGAATTTTAGCAAGCAGGCAACTGAGGTTTTAAATGAATACTTTTACTCACATCTA
AGTAATCCCTACCCAAGTGAAGAAGCAAAAGAAGAATTGGCCAGAAAATGTACAATTACT
GTATCTCAGGTTTCTAATTGGTTTGGAAACAAAAGAATTCGCTACAAAAAAAACATCGGA
AAGTTTCAAGAAGAAGCAAACTTGTATGCAGCCAAAACAGCACAAGCAGCTGTTAGTGCA
GCACAACAAGCATGTGTCCAGCAAGATGGAATAAGTGGAACGCCACCAGACCAGGATTCC
AACCAAACACTGATGGAAGGATCCCCAGACACAGGATCTGATACACCTACTTCAGGCCAA
AATTACTCGAGTCCTTCTCAACGAGCATACGGGCAACAGGGTGAAATGTTCATCGGAGTT
AATGGAGACCGTTTTGCCAATCAACAACAGAATGTGGGATTTGGTGGAGAAAGAAATGCT
TTGGGTGGACAAGCTAACATATACAGTCCACAGAATGGTGTGTGGTCAAGACAAGACACC
AGTGGAGGTTCGGCACAAAATGTCACTTCACCAGCCAGTCAATCGGATTCTGTTGATTAG
| Pfam |
PBX (IPR005542) - T[39-114] 3.5E-28 - T[114-176] 1.8E-30 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[175-238] 17.135 |
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[177-245] 7.7E-20 |
| SMART |
Homeobox_dom (IPR001356) - T[177-242] 7.0E-16 |
| CDD |
Homeobox_dom (IPR001356) - T[178-238] 1.97481E-16 |
| Pfam |
Homeobox_dom (IPR001356) - T[178-237] 1.5E-18 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[213-236] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PBX1_HUMAN | 56.993 % | 281 | 1.93E-91 |
| PBX3_HUMAN | 59.441 % | 283 | 1.95E-92 |
| PBX4_HUMAN | 55.926 % | 280 | 4.04E-92 |