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TRANSCRIPT CARD

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  1. Region 'REG00000900' > 
  2. Transcript 'KH2012:KH.L116.63.v1...' > 
  3. Transcript 'KH2012:KH.S1740.2.v1...' > 
  4. Transcript 'KH2012:KH.S654.3.v1....' > 
  5. Transcript 'Phmamm.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S206.g05359.04.t

Possible name(s)

CLSTN1; CLSTN2; CLSTN3

Gene model

Phmamm.CG.MTP2014.S206.g05359

Location

S206 [116,394 / 123,171]

Sequences

Amino acid sequence

Length: 403

>Phmamm.CG.MTP2014.S206.g05359.04.p
LICEYRLHSIGNGTADEVPFEVKVSDKQTGEGFVALKPGIDLTNCDNKTEFNFQITAYDC
GLGINGLGVIIGQRRSHSTVCVLFRSSVTVVVEDINLHHPYFPISNYSLEIEGQIEAGQP
LVSLVAMDDDCSPQFNKICHYTVIKAEADLFMATTEGILLSRKLIKAFHKPKIYNVSVVA
HDCGKEKSDPAIVTITIKPRCIAKWTVNKQIVFLYSGFNKRIELVSTLMKAVPIIDKVEL
NACISSDTIQQIDVTVSLDMSDVNSITGCDRDTYTTADSRRKCANEDKQLLELLPSFAQY
NNLIGEFSADSTSKSNLPILKRAVAKNGGRIFDFNGVHQALAVLDDGVSPALDTLKLTSK
FAVSFRMFLEGNRSSSEKQTILCKSDSSGKKFFNAFIFVFKLT

Nucleotide sequence

Length: 1,212

>Phmamm.CG.MTP2014.S206.g05359.04.t
TTAATTTGTGAGTATCGGCTTCATTCTATTGGAAATGGAACAGCTGATGAAGTTCCGTTT
GAAGTTAAAGTCAGCGACAAACAAACTGGAGAAGGATTTGTGGCATTAAAGCCTGGCATA
GATTTGACAAATTGCGACAATAAAACTGAGTTTAATTTCCAAATAACTGCCTATGATTGT
GGGCTAGGAATCAATGGATTGGGAGTGATCATAGGCCAAAGGCGATCTCACAGTACTGTA
TGTGTTTTATTTAGATCGTCTGTTACGGTTGTGGTAGAGGATATCAATCTACATCATCCG
TATTTCCCAATATCAAATTACTCCTTGGAAATCGAGGGTCAAATAGAGGCTGGGCAGCCT
TTGGTTAGTCTTGTAGCAATGGATGATGACTGCAGCCCTCAGTTCAACAAAATCTGTCAC
TACACAGTTATCAAAGCAGAAGCAGACCTATTTATGGCCACTACTGAAGGTATTCTGCTT
TCTCGTAAGCTGATCAAAGCTTTTCATAAACCTAAGATTTACAATGTGTCAGTTGTGGCT
CATGACTGTGGCAAAGAAAAGTCCGACCCAGCGATTGTTACCATTACAATCAAACCCCGC
TGTATTGCAAAATGGACAGTTAACAAACAAATTGTTTTCCTATATTCAGGGTTTAATAAA
AGAATCGAGCTCGTATCAACTCTCATGAAGGCAGTTCCGATAATTGACAAAGTGGAATTG
AATGCCTGTATTTCAAGCGACACCATCCAACAAATTGACGTCACAGTTTCGCTTGATATG
AGCGATGTGAATTCTATTACTGGATGCGATAGAGATACCTACACCACTGCTGACAGCCGA
AGAAAATGTGCAAATGAAGATAAACAACTACTGGAACTTTTGCCATCATTTGCCCAATAC
AACAATCTTATTGGCGAATTTTCAGCTGATTCAACTTCTAAAAGCAATCTGCCAATTTTG
AAGAGGGCGGTAGCCAAAAACGGAGGCAGAATTTTCGACTTCAACGGGGTTCATCAGGCA
CTGGCTGTTCTCGATGACGGGGTTTCCCCAGCTTTAGACACTTTGAAGCTGACTTCGAAG
TTTGCAGTGTCGTTTCGCATGTTCTTGGAAGGGAATCGGAGCTCTAGCGAAAAGCAGACG
ATTTTGTGCAAATCCGACAGCTCTGGTAAGAAGTTTTTTAACGCTTTCATTTTCGTGTTT
AAGTTGACCTGA

InterProScan

PANTHER
Calsyntenin (IPR026914) - T[2-391] 1.5E-63
SUPERFAMILY
Cadherin-like (IPR015919) - T[90-197] 6.08E-9

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CSTN1_HUMAN 28.429 % 146 3.89E-38
CSTN2_HUMAN 26.799 % 129 1.6E-32
CSTN3_HUMAN 29.744 % 142 9.86E-37