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TRANSCRIPT CARD

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  1. Molecular Tool 'Ci-snail mRNA'
  2. Transcript 'KH2012:KH.C5.277.v1....'
  3. Transcript 'Moocci.CG.ELv1_2.S24...'
  4. Transcript 'KH2012:KH.L121.1.v2....'
  5. Transcript 'Phmamm.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S206.g05359.02.t

Possible name(s)

CLSTN1; CLSTN2; CLSTN3

Location

S206 [104,622 / 121,448]

Sequences

Amino acid sequence

Length: 683

>Phmamm.CG.MTP2014.S206.g05359.02.p
LIKAFHKPKIYNVSVVAHDCGKEKSDPAIVTITIKPRCIAKWTGFNKRIELVSTLMKAVP
IIDKVELNACISSDTIQQIDVTVSLDMSDVNSITGCDRDTYTTADSRRKCANEDKQLLEL
LPSFAQYNNLIGEFSADSTSKSNLPILKRAVAKNGGRIFDFNGVHQALAVLDDGVSPALD
TLKLTSKFAVSFRMFLEGNRSSSEKQTILCKSDSSGLSRQHMSVYVRHCHVMLLVRNEAG
ASENLSPAEWHWKLSNQENCGGRWYRVLINVNFPNATLFLDGEKKIPFLIADDYPLHSTP
YGAKWTVGAAWSGRESKFWQHFPGKLADLVMHVGFLEDPKVMKCVDRCKEGIALKQDSNQ
DNVTQNYDPQFSLRISTNGSDITALESALSRTVYFNSRQFPATGRRRVTVETRLTCTANA
TKCPVIDDVGMYVMVVPPPDPTISLTGGGHIARSALDISTKPATVKLFDDISCLTKVDED
DKTGAFSEGTLDSCVIREHYVMGIGGTFSVHPRKLLSNNKLNIEHRSYGVAIRGIQTLAV
YEKILRSVTYYNAQAGDYDERTFSLTCFELNGRFHSNTYKLVMTILKPGIHLAPEVTEEE
AEEPLQADAPYPAALVASAYVGQIDLQRAPNEGLRRLTADHKFGRSFDIATPAIIIGICV
GLMALLVMAVAMHARSRGDVDEE

Nucleotide sequence

Length: 2,051

>Phmamm.CG.MTP2014.S206.g05359.02.t
GCTGATCAAAGCTTTTCATAAACCTAAGATTTACAATGTGTCAGTTGTGGCTCATGACTG
TGGCAAAGAAAAGTCCGACCCAGCGATTGTTACCATTACAATCAAACCCCGCTGTATTGC
AAAATGGACAGGGTTTAATAAAAGAATCGAGCTCGTATCAACTCTCATGAAGGCAGTTCC
GATAATTGACAAAGTGGAATTGAATGCCTGTATTTCAAGCGACACCATCCAACAAATTGA
CGTCACAGTTTCGCTTGATATGAGCGATGTGAATTCTATTACTGGATGCGATAGAGATAC
CTACACCACTGCTGACAGCCGAAGAAAATGTGCAAATGAAGATAAACAACTACTGGAACT
TTTGCCATCATTTGCCCAATACAACAATCTTATTGGCGAATTTTCAGCTGATTCAACTTC
TAAAAGCAATCTGCCAATTTTGAAGAGGGCGGTAGCCAAAAACGGAGGCAGAATTTTCGA
CTTCAACGGGGTTCATCAGGCACTGGCTGTTCTCGATGACGGGGTTTCCCCAGCTTTAGA
CACTTTGAAGCTGACTTCGAAGTTTGCAGTGTCGTTTCGCATGTTCTTGGAAGGGAATCG
GAGCTCTAGCGAAAAGCAGACGATTTTGTGCAAATCCGACAGCTCTGGTTTGAGTCGACA
ACATATGTCGGTGTATGTACGTCACTGTCACGTGATGCTACTGGTGCGGAACGAAGCTGG
CGCCAGTGAAAATCTCTCGCCTGCCGAATGGCATTGGAAACTTTCGAACCAAGAGAATTG
CGGTGGACGATGGTATAGAGTTCTGATCAATGTTAACTTTCCCAACGCTACTTTGTTCCT
GGACGGAGAAAAGAAGATTCCTTTCCTCATAGCGGACGACTACCCTCTACATTCAACACC
ATACGGGGCTAAATGGACGGTCGGTGCCGCCTGGTCAGGCCGCGAGTCCAAGTTTTGGCA
GCATTTTCCGGGAAAATTGGCCGATTTAGTGATGCATGTTGGCTTTCTGGAAGATCCTAA
AGTAATGAAATGTGTTGATCGGTGTAAGGAAGGAATTGCTTTAAAACAAGACTCAAATCA
GGACAACGTAACCCAGAACTATGACCCACAATTCAGTCTGCGAATATCGACGAATGGGAG
TGACATCACAGCTCTTGAGTCGGCGTTGAGCAGGACGGTTTATTTCAACAGTCGACAATT
TCCTGCCACTGGGAGGCGCCGTGTTACCGTCGAGACAAGACTAACGTGCACCGCTAACGC
CACCAAGTGTCCAGTGATCGATGACGTTGGCATGTACGTCATGGTGGTTCCCCCTCCCGA
TCCGACAATCTCTCTTACGGGAGGTGGACACATTGCCAGGTCGGCACTCGATATTTCCAC
GAAACCTGCCACAGTAAAACTTTTCGACGATATTTCGTGTCTCACAAAAGTTGACGAAGA
TGATAAAACTGGCGCATTTTCGGAAGGAACTCTTGACTCATGCGTCATCAGGGAGCATTA
CGTCATGGGAATTGGAGGAACTTTTTCGGTTCATCCCAGAAAATTACTTTCCAACAACAA
ACTCAATATCGAACATCGGTCCTACGGAGTTGCGATACGGGGAATCCAAACTCTAGCGGT
TTACGAAAAAATCCTTCGTTCTGTGACATATTACAATGCACAAGCTGGTGATTATGACGA
ACGCACCTTTTCATTGACCTGCTTTGAACTTAACGGCCGTTTCCATAGCAACACCTACAA
GCTGGTGATGACGATATTAAAACCGGGGATTCACCTTGCACCTGAAGTAACTGAAGAGGA
AGCTGAGGAACCTCTTCAGGCGGATGCTCCATATCCTGCTGCTCTGGTGGCTTCCGCTTA
TGTCGGGCAGATTGATCTACAGCGAGCCCCGAACGAGGGGCTGAGAAGACTTACTGCCGA
CCATAAATTCGGCCGATCATTTGATATCGCAACGCCAGCCATAATTATTGGGATTTGCGT
TGGTCTTATGGCGTTGCTAGTGATGGCCGTTGCTATGCATGCACGGTCACGTGGAGACGT
TGATGAAGAGG

InterProScan

PANTHER
Calsyntenin (IPR026914) - T[6-669] 8.9E-136
SUPERFAMILY
ConA-like_dom_sf (IPR013320) - T[136-332] 4.03E-12

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CSTN1_HUMAN 29.322 % 282 4.64E-83
CSTN2_HUMAN 29.046 % 277 2.13E-81
CSTN3_HUMAN 26.081 % 202 8.24E-55