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TRANSCRIPT CARD

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  1. Transcript 'Boleac.CG.SB_v3.S292...' > 
  2. Clone 'cima820480' > 
  3. Transcript 'Haaura.CG.MTP2014.S1...' > 
  4. Transcript 'Boschl.CG.Botznik201...' > 
  5. Transcript 'Phmamm.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S205.g05332.02.t

Possible name(s)

CNGA1; CNGB1; CNGB3

Gene model

Phmamm.CG.MTP2014.S205.g05332

Location

S205 [27,363 / 28,631]

Sequences

Amino acid sequence

Length: 161

>Phmamm.CG.MTP2014.S205.g05332.02.p
MIPPFNHGMPCMSMGFLIPENAPVVWRGMMVMQAVQQLLWKVYWENIDVLIVDMPPGTGD
VPLSIIQNVPISGAVIVSTPQDIALTDVRRGVEMFKKMSVPVLGLVQNMSVYLCSNCGQK
THIFGKDKLEKLTKIMDLEILGDVPLHENISEFSDKGTPFV

Nucleotide sequence

Length: 639

>Phmamm.CG.MTP2014.S205.g05332.02.t
GTCAAAGTGGGGCTGTTGGATGCCGACATATTTGGTCCATCAATTCCAAAGCTAATGCAG
ATCAACCAAAAACCAGAAGTAAACAAAGGTTTGTAGAATGCAGTCAACCACCACTAACAG
CATAGCAACTTGGTAAAATCTCTTACAGATGGTCTGATGATACCCCCCTTTAATCATGGC
ATGCCTTGCATGTCAATGGGATTTCTGATTCCGGAGAATGCCCCAGTTGTATGGAGAGGA
ATGATGGTTATGCAAGCAGTACAGCAACTTTTATGGAAGGTTTATTGGGAAAATATTGAT
GTTTTGATTGTAGACATGCCCCCTGGCACAGGTGATGTTCCGTTGTCAATCATACAAAAT
GTTCCAATATCAGGTGCTGTGATTGTATCCACTCCTCAAGACATTGCATTAACTGATGTG
CGGAGAGGAGTTGAAATGTTTAAAAAGATGAGTGTACCAGTTCTAGGCCTAGTACAAAAC
ATGAGTGTGTATTTGTGTTCAAATTGTGGACAAAAGACTCACATTTTTGGAAAAGACAAG
CTTGAGAAACTTACAAAGATCATGGACTTAGAAATACTTGGTGATGTGCCGCTACATGAA
AATATTTCCGAATTTTCAGACAAAGGAACTCCATTTGTT

InterProScan

Pfam
YlxH/NBP35 (IPR033756) - T[1-161] 4.1E-64
SUPERFAMILY
P-loop_NTPase (IPR027417) - T[7-161] 1.02E-29
CDD
Mrp/NBP35_ATP-bd (IPR019591) - T[23-148] 1.16827E-63
ProSitePatterns
Mrp_CS (IPR000808) - T[44-60] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
NUBP1_HUMAN 39.103 % 112 8.15E-31
NUBP2_HUMAN 35.897 % 103 1.38E-27
NUBPL_HUMAN 62.733 % 220 1.43E-72