- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'Phmamm.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S204.g05320.02.t
Possible name(s)
ADAMTS18; ADAMTS6; THSD4
Gene model
Location
S204 [145,193 / 155,789]
Amino acid sequence
Length: 1,150
>Phmamm.CG.MTP2014.S204.g05320.02.p
CYHVTNIFAAPKLPIGYTDILVIPPGATNIEVREYVASRNYLAMRDSSKNYVLNGNWKID
RSRALNVAGTTFRYQRKLDRHRAPESITALGPTTETIYIDLVVQGKNKGIRYSFYLPKGT
NDPNHGQYMWKADEWSECSRDCGGGTQMRRLRCYKGEEETSPFLCKSSQRPARRKTCNEE
PCKARWKAGNWTTCSATCNGGIRYRQVYCTETPPLSNSAPRLVRMDRCNEEDPNPLPDNQ
ESCNVLPCPGWEVGNWSECSTSCGPGQMTREVTCEPVQSCRSGSMPDRVMTCDLGPCTGL
QWVVSEWSECTEDCGVGMQTRLIHCVDGDGAMYDDRLCADQNKPGHHRSCTVSRGCPETL
HWMAAEWSQCSAACGVGMQTRKVVCALQRGNTFRGFPDNHCSEADELGKPPHMKNCTRPS
CQATWFTGPWSECSSTCGGGVRTRHVMCLSESTFSPLEEKDCSKEEKPVHEEICSVNPCP
LHAADDVILVDRAVVKNDANTGDDDCRTSRYGCCGDNITSARGPNGKGCTDARTNIGPTS
PPCESAEYGCCFDGKTATGSRKQGCREHDLCFVDPEHGSYCDQWISRWFYNHTTSQCEHF
WYGGCGGNRNRYATEEKCHASCKLGRLPDSSSEESNQAITAATTTAIATETATTITTTTQ
IPTTTTTLATTTPVIHSTVAFHPIPEVRRLNTNRKQAFLLSTRVSTVTRGSPNAVRPALC
TQPHVIGPCYGRYRRWFFDILDSTCKKFDYGGCAGNDNNFRSREACETTCDGRPRVTGKS
RESSYTSNFVSPDSSQTLEKSKCQRSRVLALFDGRRPPQCHPTTGEYLTRQCVSDETDVT
STCWCVNPSTGEEISGSRGMVNCDHAWKNQRSTSPCIASTYGCCPDGIISAKGPRNLGCP
RTVRFRSGRVSVLVSRGSSARLPCPAIGHPKPTVKWFKDGKAVKTSRIKIISDNDLALIL
TSVETGDAGRYTCVASNGVGTSRRRAVRLTVTEPPIQFRTRPTDVNVTSGNYAKLRCRVK
GKATIKWYKNGRPLARSIHHSVKPWGELRFSRSRASDSGRYTCIASASSGKVISASAQLS
VHPAPFTTATTTSPPFRKVTSLVTSSSKQCSDYPRYANCRLVVKAKMCRHYTKFCCKTCK
RRHHKHAALS
Nucleotide sequence
Length: 4,480
>Phmamm.CG.MTP2014.S204.g05320.02.t
TGTTACCACGTGACCAATATCTTTGCTGCTCCTAAATTGCCAATAGGGTACACAGATATT
TTGGTGATTCCCCCTGGGGCTACCAACATTGAAGTCCGGGAATACGTGGCGTCAAGAAAC
TACCTTGCGATGCGGGATTCATCAAAAAATTACGTTCTTAACGGAAATTGGAAGATCGAC
CGCTCTCGGGCATTAAATGTGGCAGGAACAACATTTCGATACCAGAGGAAACTTGACCGA
CACAGGGCGCCAGAGAGCATTACAGCGCTGGGACCCACCACGGAAACCATCTACATCGAT
TTAGTGGTGCAGGGAAAAAACAAAGGCATCAGATACAGCTTCTATCTACCGAAAGGCACG
AATGATCCCAACCACGGTCAGTACATGTGGAAAGCAGATGAGTGGAGCGAATGCTCAAGG
GACTGCGGTGGAGGTACGCAAATGCGTCGATTGCGGTGTTACAAGGGCGAGGAAGAAACG
TCGCCGTTCTTATGCAAATCTTCGCAACGACCAGCTCGACGAAAAACGTGCAACGAGGAA
CCGTGCAAAGCAAGATGGAAGGCAGGCAATTGGACCACATGTTCGGCAACTTGCAACGGT
GGCATAAGGTATAGACAGGTCTACTGTACGGAAACACCACCTTTATCCAACAGCGCCCCA
CGACTTGTTCGCATGGATCGCTGCAACGAAGAGGACCCGAATCCGTTGCCTGACAACCAA
GAAAGCTGTAACGTGCTCCCTTGCCCAGGCTGGGAGGTGGGAAATTGGTCAGAGTGTTCG
ACTTCATGCGGACCCGGTCAAATGACTCGCGAAGTCACGTGCGAACCTGTGCAGTCATGC
AGATCAGGATCGATGCCGGATAGAGTAATGACATGTGATTTGGGACCTTGTACTGGTTTG
CAATGGGTCGTCAGTGAGTGGAGTGAGTGTACTGAAGACTGTGGCGTAGGAATGCAAACT
CGACTTATCCATTGTGTGGATGGAGATGGGGCGATGTACGACGATCGTTTGTGTGCGGAT
CAAAATAAACCTGGTCACCATCGATCCTGTACCGTGTCAAGGGGATGCCCTGAAACTCTT
CACTGGATGGCGGCCGAGTGGAGTCAGTGTTCCGCTGCGTGTGGTGTCGGTATGCAAACC
CGCAAAGTAGTGTGCGCACTACAGCGGGGAAACACCTTCCGGGGTTTTCCCGATAACCAT
TGCTCAGAGGCAGACGAACTTGGAAAACCTCCGCACATGAAGAACTGCACAAGGCCGAGT
TGTCAGGCTACCTGGTTTACAGGTCCCTGGAGCGAATGTTCGTCCACTTGCGGCGGTGGA
GTGCGAACTCGTCACGTGATGTGCTTGTCGGAAAGCACTTTCAGTCCGCTTGAGGAGAAA
GACTGCAGCAAGGAGGAGAAACCGGTACACGAAGAAATTTGCAGTGTTAACCCATGTCCG
TTACACGCTGCAGACGATGTCATCCTAGTTGATCGTGCTGTTGTTAAAAATGATGCCAAT
ACGGGTGATGACGACTGTCGTACATCCCGTTACGGCTGTTGTGGGGACAACATAACGTCA
GCCCGGGGACCCAACGGAAAAGGTTGTACAGACGCCAGAACAAACATTGGACCTACATCA
CCACCTTGTGAATCAGCTGAGTACGGGTGTTGTTTCGATGGAAAAACTGCAACTGGTTCC
CGCAAGCAAGGATGCAGAGAACACGATTTGTGTTTCGTTGATCCGGAGCATGGAAGTTAC
TGCGATCAGTGGATCTCGCGCTGGTTTTATAACCACACCACGTCGCAATGCGAACATTTC
TGGTATGGAGGCTGTGGGGGAAATCGCAATAGATACGCCACAGAAGAAAAATGCCACGCA
TCATGTAAACTGGGACGGTTACCAGATTCAAGCTCGGAGGAAAGTAACCAAGCAATAACT
GCTGCGACAACCACAGCCATAGCCACAGAAACAGCAACAACCATAACAACTACCACACAG
ATTCCAACTACAACCACAACTTTAGCTACGACAACACCTGTTATACATTCTACAGTCGCA
TTCCATCCTATACCGGAGGTCAGGCGTTTGAATACCAACCGAAAACAGGCGTTTTTATTA
TCCACAAGAGTTTCGACTGTCACTCGAGGGAGCCCTAATGCAGTCAGACCCGCCCTCTGT
ACGCAACCGCACGTGATTGGTCCGTGTTATGGGCGTTACCGCCGCTGGTTTTTCGACATA
CTGGACAGCACTTGCAAGAAGTTTGACTACGGCGGCTGCGCGGGAAATGACAATAATTTC
AGGTCACGTGAAGCATGTGAAACGACCTGTGACGGTCGACCGAGAGTGACGGGTAAGTCA
CGTGAGTCATCATACACCAGCAACTTTGTGTCACCCGATTCTTCACAAACTTTAGAGAAA
TCAAAATGCCAACGCAGTCGCGTACTGGCGCTGTTCGATGGTCGTCGTCCACCCCAATGT
CACCCAACTACCGGCGAATACTTGACTCGCCAATGTGTCAGTGACGAAACCGACGTGACG
TCAACGTGTTGGTGTGTGAACCCGTCGACTGGAGAGGAAATTAGCGGATCGCGCGGAATG
GTTAATTGTGACCATGCTTGGAAAAATCAGCGTTCTACCTCACCATGCATTGCTTCCACA
TACGGTTGCTGCCCGGACGGAATAATATCTGCAAAGGGACCAAGAAACCTTGGGTGTCCA
CGAACTGTTCGATTTCGATCCGGCCGTGTTTCGGTGCTCGTTTCCCGTGGAAGCTCTGCT
CGGCTTCCATGTCCTGCGATAGGTCACCCAAAACCTACGGTCAAGTGGTTTAAAGACGGA
AAAGCAGTTAAAACCTCAAGAATTAAAATTATCAGCGATAACGACCTGGCTCTGATTCTC
ACATCGGTTGAAACTGGTGATGCAGGACGGTATACATGTGTTGCAAGTAACGGTGTGGGG
ACTTCCCGAAGAAGGGCAGTAAGACTGACCGTTACAGAACCACCAATACAATTCCGCACG
CGTCCGACTGATGTCAATGTGACGTCAGGAAACTACGCTAAGCTTCGATGTCGAGTAAAA
GGAAAAGCGACAATCAAGTGGTACAAGAACGGAAGACCTTTAGCTAGGAGTATCCATCAC
TCCGTTAAACCATGGGGCGAGCTCCGATTTAGCCGATCACGTGCGTCGGACTCTGGTCGC
TACACTTGCATCGCTAGCGCCTCCAGCGGCAAAGTTATCTCCGCTTCTGCCCAACTCAGT
GTTCATCCCGCTCCATTTACTACCGCGACAACCACGTCGCCACCCTTCAGGAAAGTGACG
TCATTGGTGACGTCATCATCAAAGCAATGTAGCGATTACCCGCGTTATGCCAACTGCAGA
CTAGTGGTAAAAGCGAAAATGTGTCGTCACTATACCAAGTTTTGTTGCAAGACGTGCAAA
AGACGTCACCACAAGCACGCGGCGCTTTCGTGATGTCATCACAGCTTGGCAACGATGGAA
TCTAGTTTGCCTTCGATCGCTGTGAGGGTCAAAGTCTAATGAGGTGAAGGACACGTTTCC
TGGAGCTACCCACTGGTTGTTATTTGTTTCAGCATATTTTTTGTCGTTTTTATCTTTTTT
ATTGTGTCAGCATATTACGTCATTACCATAGAAATAATATCACCTCATCCTGTGCGTCGA
TGACGACCTTTTTTCGATTTTGTTATTTAACTTTTGCCTCGAGTAAACCAAAATCTTTTC
ATTAATGTTGTTTGCCTTATTTAAACATTCAAATAACAAGGCAGTTGCAGAAAAGCAAAG
TTAGGGATAAAATAAATTGTATAAAGTTTAAATATAGCGGAGATCTTTTCCAAACAATTC
TGAACATTTTCCTGCATACGGACGATTCCGGTTTATGGCATAACCAATTTGCTTTTTAAT
GCAATAAACCGAGGTATGGGTTTACCCAGTAATCTATTGACTAAACTAGTTTGTACTACT
GAAGTTGCAACATATAGCGATGAGACTGATCACAAACACAACAATATTGAAATAACACTG
TTTATGTTAATAAACTGAAACGACAGAAAAATAAATTATTGAAGAATAATTATTCTCATA
ATTAATTATTAAAAATCCAAAGCCTATTTATTCAAATTATTAATAGCATAATCATAAATG
TCATTGATAGAATGAAACAAAAACAAATATTAAAACTTTACGAAAGTATGGGCTTGCGCT
CGTTATCCAGTAACTGATTTCGTCTCCTTTTATCTGCAATCCACACAATCCTGAAAGAAC
AATGCAATGATGGTTTGATGTTATTAGCTTATGTTCTGTAAAGTTTATAGGAATGCTTTG
CTTACGTCATTAGGATCATTGGAATGATCAACACGATGGCAGCAAAGAGCCATGCGAAAC
CGTGGTAGATAGAAATCGTAGACGAGTACAAAGTTAAAAATGTTACAGTCGCGGCCAGAA
AAGTAAGAATTTCGGAACTTGACAGCAAAGCAAATGAGGC
| Pfam |
ADAM_spacer1 (IPR010294) - T[4-117] 2.7E-30 |
| ProSiteProfiles |
TSP1_rpt (IPR000884) - T[126-181] 9.409 - T[182-249] 10.677 - T[251-296] 8.37 - T[298-357] 10.696 - T[358-420] 9.645 - T[421-480] 12.703 |
| SUPERFAMILY |
TSP1_rpt_sf (IPR036383) - T[127-182] 6.02E-10 - T[182-227] 8.24E-8 - T[243-297] 4.71E-7 - T[297-352] 9.81E-9 - T[361-421] 2.75E-8 - T[416-479] 1.09E-10 |
| Gene3D |
TSP1_rpt_sf (IPR036383) - T[129-182] 5.6E-9 - T[184-249] 1.2E-8 - T[250-297] 1.7E-5 - T[300-357] 4.7E-9 - T[359-421] 3.2E-8 - T[423-480] 1.2E-11 |
| SMART |
TSP1_rpt (IPR000884) - T[129-183] 1.1E-5 - T[185-249] 6.3E-4 - T[250-298] 0.066 - T[301-357] 6.3E-6 - T[361-422] 0.079 - T[424-480] 4.9E-8 |
| Pfam |
TSP1_rpt (IPR000884) - T[134-182] 0.0049 - T[189-215] 1.9E-4 - T[254-280] 0.015 - T[305-332] 0.025 - T[365-392] 3.3E-5 - T[427-479] 1.7E-8 |
| Gene3D |
Kunitz_BPTI_sf (IPR036880) - T[566-626] 8.2E-19 - T[700-772] 5.6E-20 |
| SUPERFAMILY |
Kunitz_BPTI_sf (IPR036880) - T[567-623] 6.1E-17 - T[715-771] 1.42E-17 |
| CDD |
Kunitz_BPTI (IPR002223) - T[569-623] 1.03451E-16 - T[720-770] 1.32156E-17 |
| SMART |
Kunitz_BPTI (IPR002223) - T[569-623] 5.0E-19 - T[718-771] 8.9E-19 |
| ProSiteProfiles |
Kunitz_BPTI (IPR002223) - T[571-622] 14.342 - T[720-770] 15.049 |
| Pfam |
Kunitz_BPTI (IPR002223) - T[571-623] 3.5E-15 - T[720-770] 2.5E-16 |
| ProSitePatterns |
Prtase_inh_Kunz-CS (IPR020901) - T[600-618] . - T[748-766] . |
| PRINTS |
Kunitz_BPTI (IPR002223) - T[717-731] 2.1E-7 - T[745-755] 2.1E-7 - T[755-770] 2.1E-7 |
| Gene3D |
Thyroglobulin_1_sf (IPR036857) - T[792-866] 1.0E-8 |
| ProSiteProfiles |
Thyroglobulin_1 (IPR000716) - T[800-876] 9.519 |
| SUPERFAMILY |
Thyroglobulin_1_sf (IPR036857) - T[802-865] 4.32E-12 |
| CDD |
Thyroglobulin_1 (IPR000716) - T[802-863] 3.88363E-7 |
| SMART |
Thyroglobulin_1 (IPR000716) - T[817-867] 1.2E-5 |
| ProSiteProfiles |
Ig-like_dom (IPR007110) - T[900-990] 14.092 - T[994-1080] 11.533 |
| Gene3D |
Ig-like_fold (IPR013783) - T[900-994] 1.3E-22 - T[995-1086] 1.1E-19 |
| SUPERFAMILY |
Ig-like_dom_sf (IPR036179) - T[907-997] 9.96E-23 - T[995-1087] 6.73E-18 |
| SMART |
Ig_sub (IPR003599) - T[909-992] 6.8E-12 - T[1002-1082] 2.2E-10 |
| Pfam |
Ig_I-set (IPR013098) - T[910-985] 3.2E-16 - T[997-1081] 1.4E-13 |
| SMART |
Ig_sub2 (IPR003598) - T[915-980] 1.2E-15 - T[1008-1070] 7.1E-9 |
| ProSiteProfiles |
PLAC (IPR010909) - T[1106-1143] 9.326 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ATS6_HUMAN | 35.143 % | 216 | 3.31E-57 |
| THSD4_HUMAN | 31.418 % | 219 | 1.21E-58 |
| ATS18_HUMAN | 34.253 % | 224 | 6.15E-60 |