- Transcript 'KH2012:KH.C9.287.v3....' >
- Clone 'ma310n02' >
- Transcript 'Phmamm.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S204.g05320.01.t
Possible name(s)
ADAMTS18; ADAMTS6; THSD4
Gene model
Location
S204 [145,000 / 154,514]
Amino acid sequence
Length: 976
>Phmamm.CG.MTP2014.S204.g05320.01.p
MMLGSGLEEDQCRDCGGDGSSCYHVTNIFAAPKLPIGDGSSCYHVTNIFAAPKLPIGYTD
ILVIPPGATNIEVREYVASRNYLAMRDSSKNYVLNGNWKIDRSRALNVAGTTFRYQRKLD
RHRAPESITALGPTTETIYIDLVVQGKNKGIRYSFYLPKGTNDPNHGQYMWKADEWSECS
RDCGGGTQMRRLRCYKGEEETSPFLCKSSQRPARRKTCNEEPCKASAPRLVRMDRCNEED
PNPLPDNQESCNVLPCPGWEVGNWSECSTSCGPGQMTREVTCEPVQSCRSGSMPDRVMTC
DLGPCTGLQWVVSEWSECTEDCGVGMQTRLIHCVDGDGAMYDDRLCADQNKPGHHRSCTV
SRGCPETLHWMAAEWSPWSECSSTCGGGVRTRHVMCLSESTFSPLEEKDCSKEEKPVHEE
ICSVNPCPLHAADDVILVDRAVVKNDANTGDDDCRTSRYGCCGDNITSARGPNGKGCTDA
RTNIGPTSPPCESAEYGCCFDGKTATGSRKQGCREHDSSSEESNQAITAATTTAIATETA
TTITTTTQIPTTTTTLATTTPVIHSTVAFHPIPEVRRLNTNRKQAFLLSTRVSTVTRGSP
NAVRPALCTQPHVIGPCYGRYRRWFFDILDSTCKKFDYGGCAGNDNNFRSREACETTCDG
RPRVTGKSRESSYTSNFVSPDSSQTLEKSKCQRSRVLALFDGRRPPQCHPTTGEYLTRQC
VSDETDVTSTCWCVNPSTGEEISGSRGMVNCDHAWKNQRSTSPCIASTYGCCPDGIISAK
GPRNLGCPRTVRFRSGRVSVLVSRGSSARLPCPAIGHPKPTVKWFKDGKAVKTSRIKIIS
DNDLALILTSVETGDAGRYTCVASNGVGTSRRRAVRLTVTEPPIQFRTRPTDVNVTSGNY
AKLRCRVKGKATIKWYKNGRPLARSIHHSVKPWGELRFSRSRASDSGRYTCIASASSGKV
ISASAQLSVHPGNKHK
Nucleotide sequence
Length: 2,931
>Phmamm.CG.MTP2014.S204.g05320.01.t
ATGATGCTAGGATCTGGGCTTGAGGAAGATCAATGCAGGGATTGTGGAGGCGACGGCTCC
TCCTGTTACCACGTGACCAATATCTTTGCTGCTCCCAAATTGCCAATAGGCGACGGCTCC
TCCTGTTACCACGTGACCAATATCTTTGCTGCTCCTAAATTGCCAATAGGGTACACAGAT
ATTTTGGTGATTCCCCCTGGGGCTACCAACATTGAAGTCCGGGAATACGTGGCGTCAAGA
AACTACCTTGCGATGCGGGATTCATCAAAAAATTACGTTCTTAACGGAAATTGGAAGATC
GACCGCTCTCGGGCATTAAATGTGGCAGGAACAACATTTCGATACCAGAGGAAACTTGAC
CGACACAGGGCGCCAGAGAGCATTACAGCGCTGGGACCCACCACGGAAACCATCTACATC
GATTTAGTGGTGCAGGGAAAAAACAAAGGCATCAGATACAGCTTCTATCTACCGAAAGGC
ACGAATGATCCCAACCACGGTCAGTACATGTGGAAAGCAGATGAGTGGAGCGAATGCTCA
AGGGACTGCGGTGGAGGTACGCAAATGCGTCGATTGCGGTGTTACAAGGGCGAGGAAGAA
ACGTCGCCGTTCTTATGCAAATCTTCGCAACGACCAGCTCGACGAAAAACGTGCAACGAG
GAACCGTGCAAAGCAAGCGCCCCACGACTTGTTCGCATGGATCGCTGCAACGAAGAGGAC
CCGAATCCGTTGCCTGACAACCAAGAAAGCTGTAACGTGCTCCCTTGCCCAGGCTGGGAG
GTGGGAAATTGGTCAGAGTGTTCGACTTCATGCGGACCCGGTCAAATGACTCGCGAAGTC
ACGTGCGAACCTGTGCAGTCATGCAGATCAGGATCGATGCCGGATAGAGTAATGACATGT
GATTTGGGACCTTGTACTGGTTTGCAATGGGTCGTCAGTGAGTGGAGTGAGTGTACTGAA
GACTGTGGCGTAGGAATGCAAACTCGACTTATCCATTGTGTGGATGGAGATGGGGCGATG
TACGACGATCGTTTGTGTGCGGATCAAAATAAACCTGGTCACCATCGATCCTGTACCGTG
TCAAGGGGATGCCCTGAAACTCTTCACTGGATGGCGGCCGAGTGGAGTCCCTGGAGCGAA
TGTTCGTCCACTTGCGGCGGTGGAGTGCGAACTCGTCACGTGATGTGCTTGTCGGAAAGC
ACTTTCAGTCCGCTTGAGGAGAAAGACTGCAGCAAGGAGGAGAAACCGGTACACGAAGAA
ATTTGCAGTGTTAACCCATGTCCGTTACACGCTGCAGACGATGTCATCCTAGTTGATCGT
GCTGTTGTTAAAAATGATGCCAATACGGGTGATGACGACTGTCGTACATCCCGTTACGGC
TGTTGTGGGGACAACATAACGTCAGCCCGGGGACCCAACGGAAAAGGTTGTACAGACGCC
AGAACAAACATTGGACCTACATCACCACCTTGTGAATCAGCTGAGTACGGGTGTTGTTTC
GATGGAAAAACTGCAACTGGTTCCCGCAAGCAAGGATGCAGAGAACACGATTCAAGCTCG
GAGGAAAGTAACCAAGCAATAACTGCTGCGACAACCACAGCCATAGCCACAGAAACAGCA
ACAACCATAACAACTACCACACAGATTCCAACTACAACCACAACTTTAGCTACGACAACA
CCTGTTATACATTCTACAGTCGCATTCCATCCTATACCGGAGGTCAGGCGTTTGAATACC
AACCGAAAACAGGCGTTTTTATTATCCACAAGAGTTTCGACTGTCACTCGAGGGAGCCCT
AATGCAGTCAGACCCGCCCTCTGTACGCAACCGCACGTGATTGGTCCGTGTTATGGGCGT
TACCGCCGCTGGTTTTTCGACATACTGGACAGCACTTGCAAGAAGTTTGACTACGGCGGC
TGCGCGGGAAATGACAATAATTTCAGGTCACGTGAAGCATGTGAAACGACCTGTGACGGT
CGACCGAGAGTGACGGGTAAGTCACGTGAGTCATCATACACCAGCAACTTTGTGTCACCC
GATTCTTCACAAACTTTAGAGAAATCAAAATGCCAACGCAGTCGCGTACTGGCGCTGTTC
GATGGTCGTCGTCCACCCCAATGTCACCCAACTACCGGCGAATACTTGACTCGCCAATGT
GTCAGTGACGAAACCGACGTGACGTCAACGTGTTGGTGTGTGAACCCGTCGACTGGAGAG
GAAATTAGCGGATCGCGCGGAATGGTTAATTGTGACCATGCTTGGAAAAATCAGCGTTCT
ACCTCACCATGCATTGCTTCCACATACGGTTGCTGCCCGGACGGAATAATATCTGCAAAG
GGACCAAGAAACCTTGGGTGTCCACGAACTGTTCGATTTCGATCCGGCCGTGTTTCGGTG
CTCGTTTCCCGTGGAAGCTCTGCTCGGCTTCCATGTCCTGCGATAGGTCACCCAAAACCT
ACGGTCAAGTGGTTTAAAGACGGAAAAGCAGTTAAAACCTCAAGAATTAAAATTATCAGC
GATAACGACCTGGCTCTGATTCTCACATCGGTTGAAACTGGTGATGCAGGACGGTATACA
TGTGTTGCAAGTAACGGTGTGGGGACTTCCCGAAGAAGGGCAGTAAGACTGACCGTTACA
GAACCACCAATACAATTCCGCACGCGTCCGACTGATGTCAATGTGACGTCAGGAAACTAC
GCTAAGCTTCGATGTCGAGTAAAAGGAAAAGCGACAATCAAGTGGTACAAGAACGGAAGA
CCTTTAGCTAGGAGTATCCATCACTCCGTTAAACCATGGGGCGAGCTCCGATTTAGCCGA
TCACGTGCGTCGGACTCTGGTCGCTACACTTGCATCGCTAGCGCCTCCAGCGGCAAAGTT
ATCTCCGCTTCTGCCCAACTCAGTGTTCATCCCGGTAATAAACATAAATAA
| Pfam |
ADAM_spacer1 (IPR010294) - T[45-158] 2.1E-30 |
| ProSiteProfiles |
TSP1_rpt (IPR000884) - T[167-224] 10.107 - T[255-304] 9.576 - T[306-365] 10.696 - T[370-428] 12.1 |
| SUPERFAMILY |
TSP1_rpt_sf (IPR036383) - T[168-223] 4.84E-10 - T[251-305] 2.22E-7 - T[305-360] 7.32E-9 - T[369-427] 6.15E-13 |
| SMART |
TSP1_rpt (IPR000884) - T[170-224] 1.1E-5 - T[258-306] 0.066 - T[309-365] 6.3E-6 - T[372-428] 4.1E-10 |
| Gene3D |
TSP1_rpt_sf (IPR036383) - T[170-223] 4.6E-9 - T[258-305] 1.4E-5 - T[308-365] 3.8E-9 - T[371-428] 1.9E-13 |
| Pfam |
TSP1_rpt (IPR000884) - T[175-223] 0.004 - T[262-288] 0.012 - T[313-340] 0.021 - T[374-427] 6.2E-10 |
| Gene3D |
Kunitz_BPTI_sf (IPR036880) - T[588-660] 4.6E-20 |
| SUPERFAMILY |
Kunitz_BPTI_sf (IPR036880) - T[603-659] 1.22E-17 |
| PRINTS |
Kunitz_BPTI (IPR002223) - T[605-619] 1.3E-7 - T[633-643] 1.3E-7 - T[643-658] 1.3E-7 |
| SMART |
Kunitz_BPTI (IPR002223) - T[606-659] 8.9E-19 |
| Pfam |
Kunitz_BPTI (IPR002223) - T[608-658] 2.1E-16 |
| ProSiteProfiles |
Kunitz_BPTI (IPR002223) - T[608-658] 15.049 |
| CDD |
Kunitz_BPTI (IPR002223) - T[608-658] 2.97652E-18 |
| ProSitePatterns |
Prtase_inh_Kunz-CS (IPR020901) - T[636-654] . |
| Gene3D |
Thyroglobulin_1_sf (IPR036857) - T[680-754] 8.5E-9 |
| ProSiteProfiles |
Thyroglobulin_1 (IPR000716) - T[688-764] 9.519 |
| SUPERFAMILY |
Thyroglobulin_1_sf (IPR036857) - T[690-753] 3.53E-12 |
| CDD |
Thyroglobulin_1 (IPR000716) - T[690-751] 1.42811E-7 |
| SMART |
Thyroglobulin_1 (IPR000716) - T[705-755] 1.2E-5 |
| ProSiteProfiles |
Ig-like_dom (IPR007110) - T[788-878] 14.092 - T[882-968] 11.533 |
| Gene3D |
Ig-like_fold (IPR013783) - T[788-882] 1.0E-22 - T[883-975] 8.7E-20 |
| SUPERFAMILY |
Ig-like_dom_sf (IPR036179) - T[795-885] 7.99E-23 - T[876-970] 5.75E-17 |
| SMART |
Ig_sub (IPR003599) - T[797-880] 6.8E-12 - T[890-970] 2.2E-10 |
| Pfam |
Ig_I-set (IPR013098) - T[798-873] 2.6E-16 - T[885-969] 1.1E-13 |
| SMART |
Ig_sub2 (IPR003598) - T[803-868] 1.2E-15 - T[896-958] 7.1E-9 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ATS6_HUMAN | 33.181 % | 211 | 2.81E-56 |
| ATS18_HUMAN | 32.658 % | 202 | 3.14E-53 |
| PPN_HUMAN | 26.206 % | 273 | 1.75E-76 |