- Transcript 'Phmamm.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S203.g05309.01.t
Possible name(s)
HDHD5
Gene model
Location
S203 [167,540 / 174,155]
Amino acid sequence
Length: 442
>Phmamm.CG.MTP2014.S203.g05309.01.p
MSTAALHKVSRTCLNSFKTSLIYTSSSKLHYDSSKEPNFGLLFDIDGVLIRGKKAIPAAK
KAFKQKLVNKDGKFRVPTVFVTNAGNALAQTKAEQLSKLLEVEITSEQVMMSHSPLRMFD
EFHDKCVLLSGQGPVDKIAERIGFQNTITIDQIRSAFPNLDMVDHQRRPKLPPHAPSDTF
PKIEAVVLFGEPVRWETNLQLIIDILLTHGSLSDPIVETTDKHLPVLACNMDLLWMSESH
MPRFGHGTFMHCLESVYEKMVGKPLTYTALMGKPSEITYMYAEQLIRKQSARMGLSAPVK
TLYAIGDNPMADIYGANLYNKRIKEQQELTQIQATSESGTVRSQPWRQVHAGIRSITTAA
TQNDPVTSQVQESHVESCHSVLVCTGVYSPQPGESPYQIPPVFHGPRDIEFDVNLCMPSY
ITKDANAALDVIFDLQKFPMTS
Nucleotide sequence
Length: 1,329
>Phmamm.CG.MTP2014.S203.g05309.01.t
ATGTCGACTGCTGCTCTACATAAAGTCTCCAGGACTTGCCTAAATTCGTTCAAAACATCA
CTCATATACACAAGCTCATCAAAACTTCATTACGATTCCTCAAAGGAGCCGAACTTTGGG
CTGCTGTTTGACATTGACGGAGTTCTTATTCGGGGCAAAAAAGCAATTCCTGCTGCTAAA
AAAGCTTTTAAACAAAAACTAGTCAACAAAGATGGAAAGTTTCGGGTTCCAACTGTTTTC
GTGACAAATGCTGGAAACGCTCTCGCACAAACTAAAGCAGAGCAACTCTCTAAATTACTT
GAAGTCGAGATTACCTCAGAGCAAGTAATGATGTCTCACAGTCCATTACGAATGTTCGAT
GAATTCCACGACAAATGTGTCTTACTGTCAGGACAAGGACCAGTTGATAAAATAGCAGAA
AGAATTGGATTCCAAAACACAATCACGATCGATCAAATTCGCTCAGCTTTTCCTAACCTA
GATATGGTTGACCATCAAAGACGCCCAAAACTGCCCCCTCATGCACCAAGTGACACATTC
CCCAAAATTGAAGCAGTAGTTTTGTTCGGCGAACCAGTGAGGTGGGAAACCAATCTTCAA
CTGATCATCGATATTCTTCTCACACATGGATCGTTAAGCGACCCAATTGTGGAGACAACC
GACAAACATCTGCCTGTGTTGGCTTGTAACATGGATTTACTATGGATGTCTGAAAGCCAC
ATGCCAAGATTTGGACATGGCACATTCATGCATTGTTTGGAAAGTGTTTATGAGAAGATG
GTGGGAAAGCCGTTGACTTACACAGCTCTGATGGGAAAACCAAGCGAGATAACTTACATG
TACGCTGAACAACTTATCCGAAAGCAGTCGGCAAGGATGGGACTCAGTGCACCAGTTAAA
ACCCTTTATGCCATTGGAGATAATCCAATGGCTGACATTTATGGTGCAAATCTGTACAAC
AAACGGATAAAAGAACAACAGGAATTAACTCAGATCCAAGCTACAAGCGAATCAGGCACA
GTCCGATCGCAGCCATGGAGACAAGTACATGCTGGTATTCGGAGTATTACAACTGCTGCA
ACACAAAATGATCCTGTGACATCACAAGTACAAGAAAGTCATGTGGAATCTTGTCATTCA
GTGTTGGTGTGCACTGGAGTTTATTCACCACAACCAGGGGAAAGCCCGTACCAAATCCCA
CCAGTTTTCCATGGACCTCGTGATATAGAGTTTGACGTCAACCTCTGCATGCCTTCCTAC
ATCACCAAAGACGCCAACGCAGCCCTCGACGTCATATTTGACTTACAAAAGTTCCCTATG
ACATCATAA
| TIGRFAM |
HAD-SF_hydro_IIA_CECR5 (IPR006353) - T[39-319] 1.6E-97 |
| SUPERFAMILY |
HAD-like_sf (IPR036412) - T[41-394] 3.72E-27 |
| Pfam |
HAD-SF_hydro_IIA (IPR006357) - T[41-145] 4.4E-18 |
| TIGRFAM |
HAD-SF_hydro_IIA (IPR006357) - T[42-317] 7.4E-59 |
| Gene3D |
HAD_sf (IPR023214) - T[42-320] 6.6E-68 - T[112-271] 6.6E-68 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HDHD5_HUMAN | 48.529 % | 402 | 2.51E-138 |
