- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S1.g00061.01.t
Possible name(s)
LENG8; MCM3AP; SAC3D1
Gene model
Location
S1 [665,907 / 686,288]
Amino acid sequence
Length: 1,471
>Phmamm.CG.MTP2014.S1.g00061.01.p
MSNRGLFGSTETPSFGFSPSQEQTTNSALFGSTQSTSSTSSATSSRAGLFSSQSKPESKP
SFGFSSTSQSGSLFGSQSQPSGTSFQSAGSFSQKTEIPKLFGTPEQTSKPSFSFKQPAIN
STPIQQQPQSGLFSSSNQTSGFNKANPNQQLFSSNPADWKPQKLFAGSPESSNVVNFGAS
ISQQFQEKPQQSVSRRTILERIGRKRSLDDSEGGSGRVDDNEQVPTSHADGNKPLKRIAQ
GPAPGLFSRTVAGVGIKISQQTASNQQNFPKRPSGSMGAPMMKTPVRRKSSSALTSPTEA
ALIPTLTALNCTKIPEQFNNKEKLRKYFSRFGKVKLVRSNPAKKTAFIQYYTHEDAANAK
KRGKESSKKLMFQKKTVVRTGSVRQRRFQTDKPSLKTSGLFYARTDSEKLQLLEKIEKIL
RSKIVKESNLSKAKVAIGTCPDMCPEKERYLRQHRNLLAGYEMDPGKILNHNLAVKEYSR
SSADQEEALAHELRPSPVLRITMDYLLTHVMKQIDSERIADWYDFLWNRTRAIRKEISIQ
QANDPLAVQVAEECARFHICCGHELCEEDRLVFDPKINNENLEKAMKTVLDMYNDVRSKH
THDLINESEFLAYHILLNINKSSDVLRLAVAAFSAVHSNNYSRFFSVLQHTSYLQAAILH
RYFEQVRKQAIVTMARAYSTAKSNAVLPVEHVIKVLHLNDVDEMTSFCNDHMIPMNNGHI
ELSRSESYDTEDGVTIMKSHEITAKMHGRNLGEIIAHNREPSHEIHEPVSSFDENGKYIG
PHTALLNMDPTAEVEKEKPSNVVAPAPPSVEQQTMTSTTVILQKKGVTDARESRKDSCIP
PQIFLAYALPYGGECLGDQLIRKEKEEREAEQRAKEEAERVESERVRLEAEERRRKEKNE
SIARCVAILCDDIQGEVVMEIANKIAKDQLREERLDWYSDIITNDVINSTTGDDLRKVVK
SVVKDERRVKLDEIKKQVHTRISVINFKRWQKSLTNLRRQRHARETFPSAPFNRKLDKQI
SDLLPVTSGGIDAEKWRFSLDKMHNCQLAVESAPRLLEKHKEVIESLRETTRGAISMRVA
AMSHDLPLTDLYHDHFVLPKLNAIVNTGSNNIVNYWWKICVGFQQESSERISLQWMKNKF
GCLNENSAVASKIFVNEKKISCKVTTCVETIEIVTRQKLLGSTSLVYVVTYDNHLSAAKL
EDGIIWLATNSLPPPCVRFNFLREILEEQISYKYITPMCRHQTLREKIGLPAMQANDVIE
IYNGLLLTLSDVLTNRELINVSWPPYQMIGEDESIPCNLSLTWNTQQQFDKITSILTSLQ
LPEFPTTHNTGDLVVGYFPADLDLVKIPKHYDEMFSQTEFLAISTKKEDLERQQMSKVDL
SQTLHSMMEGSVSNLSKILNQTSQDYPSLKAQWSGSNPMQGTLQEASKLKQDIQLEKQKS
QRFESQLRDLLDDGEIANYSFEAGDLSLLFS
Nucleotide sequence
Length: 4,416
>Phmamm.CG.MTP2014.S1.g00061.01.t
ATGTCTAACCGTGGATTGTTTGGTTCTACTGAAACTCCATCATTTGGTTTTTCACCGTCC
CAAGAACAAACAACCAACAGCGCTTTATTTGGATCAACACAGTCAACTTCATCAACCTCA
TCTGCCACAAGTAGCCGTGCCGGTTTGTTTTCATCACAAAGTAAGCCTGAATCGAAACCT
TCATTTGGGTTTTCGTCAACCAGCCAAAGTGGATCATTATTCGGAAGTCAATCTCAACCA
AGCGGAACGTCTTTTCAATCGGCAGGATCTTTTTCACAGAAAACAGAAATACCGAAATTG
TTTGGGACTCCAGAACAGACGTCTAAACCTTCATTTTCATTTAAACAACCTGCAATCAAT
TCAACACCGATACAACAACAGCCTCAATCTGGTCTTTTCTCATCTTCGAATCAAACCAGT
GGATTCAACAAAGCAAATCCAAACCAACAGTTATTTTCCTCGAATCCTGCCGATTGGAAA
CCGCAAAAGTTGTTTGCTGGATCACCAGAGTCATCCAATGTCGTAAACTTTGGTGCCTCA
ATCTCCCAACAGTTTCAAGAAAAACCACAACAAAGTGTCTCTCGTCGGACAATACTTGAG
AGAATTGGCAGAAAAAGATCTTTGGATGATTCTGAAGGTGGTAGTGGGAGAGTTGATGAC
AACGAACAAGTTCCAACAAGTCATGCGGATGGAAACAAACCACTGAAGAGAATTGCACAA
GGACCAGCTCCTGGACTTTTTAGTCGAACAGTGGCTGGTGTTGGTATCAAGATTTCACAA
CAAACAGCTTCAAATCAGCAAAACTTTCCAAAACGACCTTCAGGAAGTATGGGAGCTCCT
ATGATGAAAACTCCAGTCAGAAGAAAATCTTCATCAGCTCTCACTTCTCCAACTGAAGCT
GCTTTAATCCCAACTTTAACTGCTCTGAACTGCACAAAAATTCCAGAACAATTTAACAAC
AAAGAAAAGCTGAGGAAATATTTTTCAAGGTTTGGAAAAGTTAAACTTGTTCGCTCAAAC
CCTGCCAAGAAGACTGCTTTCATACAATATTACACACATGAAGATGCAGCCAACGCCAAG
AAGAGAGGAAAGGAGTCAAGCAAGAAGCTTATGTTTCAAAAAAAGACTGTGGTACGAACT
GGAAGCGTTCGACAACGAAGATTTCAAACAGATAAACCTTCTCTTAAAACCAGTGGTTTG
TTTTATGCGAGAACCGATTCAGAAAAATTGCAACTACTGGAAAAAATTGAAAAGATTCTT
CGATCAAAGATTGTTAAAGAATCGAATCTCTCCAAAGCGAAAGTTGCGATCGGAACATGT
CCTGATATGTGTCCGGAAAAGGAAAGGTATCTGAGGCAGCATAGAAATCTTCTTGCAGGT
TACGAAATGGACCCGGGAAAAATATTAAATCACAATCTTGCCGTGAAGGAATACAGCAGA
TCTTCAGCGGATCAAGAGGAGGCATTAGCCCATGAACTCCGCCCCTCTCCAGTTCTACGG
ATTACAATGGATTATCTACTCACTCATGTCATGAAGCAAATCGACTCAGAGAGGATTGCA
GACTGGTATGATTTTCTGTGGAACCGAACAAGGGCAATCAGAAAAGAAATTTCAATTCAA
CAAGCCAACGATCCACTAGCTGTGCAAGTTGCAGAGGAATGTGCGAGGTTTCACATTTGT
TGTGGTCATGAATTATGCGAGGAAGATAGATTAGTGTTTGACCCAAAAATCAACAACGAG
AACTTGGAGAAAGCGATGAAGACAGTGTTGGATATGTACAATGATGTGAGAAGCAAACAC
ACTCATGATTTGATCAATGAGTCGGAGTTTCTGGCGTACCACATTCTACTCAACATCAAC
AAAAGTTCAGATGTGCTGAGGTTGGCTGTAGCGGCTTTCTCTGCAGTTCACAGCAACAAC
TATTCACGATTCTTCAGTGTGCTACAACACACATCATACCTGCAAGCTGCCATTCTACAC
AGATACTTTGAACAGGTTCGGAAACAAGCAATTGTAACGATGGCTCGAGCTTACAGCACT
GCAAAATCTAATGCTGTTTTGCCTGTTGAACATGTCATCAAAGTTTTACATCTGAATGAT
GTTGATGAAATGACGTCGTTTTGTAACGATCATATGATACCCATGAACAATGGACACATT
GAATTGAGTCGTTCAGAATCATATGATACAGAGGATGGTGTCACGATCATGAAATCACAT
GAGATCACAGCAAAAATGCATGGAAGAAATCTTGGTGAAATTATTGCTCACAACCGTGAA
CCATCTCACGAAATTCATGAACCTGTGTCAAGTTTTGATGAAAATGGAAAATACATTGGC
CCTCATACTGCTTTGCTTAATATGGATCCCACAGCTGAAGTTGAAAAGGAAAAACCGTCA
AATGTTGTCGCCCCAGCCCCACCTAGTGTTGAGCAACAAACGATGACGTCAACTACCGTG
ATCTTGCAGAAGAAAGGCGTAACTGACGCGCGTGAGTCCCGGAAAGACTCCTGTATCCCA
CCGCAGATTTTTCTAGCCTACGCTTTGCCATATGGTGGTGAATGCTTGGGAGACCAGCTG
ATTCGGAAGGAGAAAGAAGAGAGAGAAGCGGAGCAAAGAGCAAAAGAGGAGGCGGAGCGA
GTTGAGAGTGAGAGAGTGAGATTGGAAGCCGAAGAAAGAAGAAGAAAGGAAAAGAATGAA
TCAATCGCGCGGTGTGTGGCGATCCTCTGTGACGACATACAAGGAGAGGTTGTCATGGAG
ATTGCGAATAAAATTGCCAAAGATCAATTGAGGGAAGAGAGGTTGGATTGGTACTCTGAC
ATCATCACTAATGACGTCATCAACTCAACAACGGGTGATGATTTGAGAAAAGTAGTTAAA
TCGGTTGTGAAGGATGAGAGGAGAGTTAAGTTGGATGAGATCAAGAAACAAGTCCACACA
AGAATTTCCGTCATTAATTTTAAAAGATGGCAGAAATCGTTGACGAACTTGAGGCGACAA
CGTCACGCCCGAGAAACGTTTCCCAGCGCTCCGTTCAACCGGAAGTTAGATAAACAGATT
TCCGATCTACTTCCGGTCACCTCCGGTGGAATTGACGCAGAGAAATGGAGATTTTCACTT
GATAAAATGCACAACTGCCAACTCGCTGTCGAATCCGCACCGAGATTGTTGGAAAAACAT
AAAGAAGTTATTGAAAGTTTGCGAGAAACAACAAGAGGCGCTATTTCGATGCGAGTCGCT
GCGATGTCACATGATCTGCCACTGACTGACTTGTACCACGATCATTTCGTTCTTCCTAAA
CTGAATGCGATCGTAAATACTGGGAGTAACAACATCGTAAATTACTGGTGGAAAATTTGC
GTTGGATTCCAGCAAGAATCTTCAGAAAGAATTTCCCTGCAGTGGATGAAAAATAAGTTT
GGATGTCTGAATGAAAATTCTGCTGTGGCTTCAAAAATATTTGTGAACGAGAAAAAGATT
TCATGCAAAGTTACAACTTGTGTTGAGACAATTGAGATTGTTACAAGACAGAAGTTATTA
GGAAGTACAAGTTTGGTTTATGTCGTCACATATGATAATCATTTGTCAGCAGCAAAGCTC
GAAGACGGGATAATTTGGCTGGCGACAAACTCACTACCTCCACCATGTGTTCGATTCAAC
TTTCTCCGTGAAATTTTGGAGGAGCAGATCTCATACAAATACATCACTCCGATGTGTAGA
CATCAAACTTTAAGGGAGAAAATTGGTTTACCTGCCATGCAAGCAAATGATGTGATTGAG
ATCTACAATGGTTTACTTTTAACTTTGAGTGATGTTTTGACGAATCGTGAATTGATCAAT
GTGTCGTGGCCTCCGTATCAGATGATTGGTGAAGATGAATCAATCCCATGCAATCTTTCA
TTAACATGGAATACACAACAACAGTTCGACAAAATCACGTCAATTTTAACCTCTTTACAA
CTTCCAGAATTTCCCACCACACATAACACAGGTGATTTGGTTGTGGGATATTTTCCAGCC
GATTTAGATTTGGTAAAAATCCCAAAACACTATGATGAGATGTTTTCTCAAACTGAGTTT
TTGGCGATCTCCACTAAAAAGGAAGATCTTGAGAGACAACAAATGAGCAAAGTGGATTTA
AGTCAGACGTTGCATTCAATGATGGAAGGTTCTGTTTCCAATTTGTCCAAAATACTTAAC
CAAACTTCACAGGACTATCCCAGTTTAAAAGCTCAATGGTCAGGGAGCAATCCCATGCAA
GGAACGTTGCAGGAAGCGTCCAAACTTAAACAAGATATTCAGCTCGAAAAACAAAAAAGT
CAAAGATTTGAAAGTCAACTTCGAGATCTTCTTGATGATGGAGAAATCGCAAACTATTCA
TTTGAGGCTGGCGATTTATCGTTGCTCTTCAGTTAA
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[304-381] 4.6E-10 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[305-362] 4.62E-9 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[307-377] 9.064 |
| SMART |
RRM_dom (IPR000504) - T[308-379] 0.0069 |
| Pfam |
RRM_dom (IPR000504) - T[320-361] 1.1E-5 |
| Pfam |
SAC3/GANP/THP3 (IPR005062) - T[438-715] 1.4E-84 |
| Pfam |
MCM3AP_GANP (IPR031907) - T[1177-1326] 5.3E-14 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| GANP_HUMAN | 32.394 % | 350 | 1.99E-98 |
| SAC31_HUMAN | 26.879 % | 102 | 9.26E-23 |
