- Transcript 'KH2012:KH.C7.752.v1....' >
- Region 'REG00000379' >
- Region 'REG00000007' >
- Transcript 'KH2012:KH.C3.469.v1....' >
- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S1.g00055.01.t
Possible name(s)
NHP2; RPL7A; SNU13
Gene model
Location
S1 [589,203 / 591,113]
Amino acid sequence
Length: 126
>Phmamm.CG.MTP2014.S1.g00055.01.p
MTGINPKAYPLANDGLTKTILDLMQQAANYKQLRKGANEATKTLNRGISELIVLAADAEP
LEILLHLPLLCEDKNVPYVFVPSKQSLGRACGVSRPVIAGSITVKEGSQLKSQIDSLKNN
IEKLLV
Nucleotide sequence
Length: 767
>Phmamm.CG.MTP2014.S1.g00055.01.t
TGCAAAATGTGAGCAAGTTAATGTGAATTACAACTAAAGGGACCTCAGTGAAGCCGTGAT
CATTAGTGAGCGGAGAGGAATCGAACAATTTGAAAAATGACTGGCATAAATCCCAAAGCT
TATCCTTTGGCCAATGATGGTTTGACAAAAACAATTTTGGATTTGATGCAACAAGCGGCA
AATTATAAACAGCTTCGCAAGGGTGCAAATGAAGCAACGAAAACATTGAATCGTGGAATA
TCTGAGCTGATTGTTCTGGCTGCCGATGCAGAACCATTGGAAATTTTGCTTCACCTTCCA
TTATTGTGTGAAGATAAAAATGTCCCATATGTGTTTGTGCCCTCAAAACAAAGTTTGGGA
CGAGCTTGTGGCGTTTCTCGTCCAGTAATTGCTGGATCGATAACTGTCAAGGAAGGATCT
CAGTTGAAATCACAAATCGACAGTTTGAAAAATAACATCGAAAAACTGCTTGTGTAAAAA
TGTGATGTTAATACTGCCATCGTGTGTTGTAATTTCAATTGTCACTGTCAATACAACATG
AACAATCACATTGTTTGATTCTCTTGTTTGGAACAATCTCATTGTTATTATCTCTGCTAG
TTTTGCTGAGTAGAAACTCAAATAGCCTTTGTTGCTGGCATCAACTTGGGTTGGTATTTT
CTTTTGATTTATTCAAACAGGTTTTTATGTTGAAGTTGAGTTTGTTGTTTGTCCGTTCAA
GGGAATAATGTCTGGAAATGTTAAATCATATTTGAGACATTTATTCC
| Gene3D |
L30e-like (IPR029064) - T[2-126] 3.8E-52 |
| SUPERFAMILY |
L30e-like (IPR029064) - T[2-124] 5.8E-37 |
| PRINTS |
H/ACA_rnp_Nhp2_euk (IPR002415) - T[6-19] 2.9E-26 - T[19-34] 2.9E-26 - T[36-46] 2.9E-26 - T[80-92] 2.9E-26 |
| Pfam |
Ribosomal_L7Ae/L30e/S12e/Gad45 (IPR004038) - T[20-109] 3.7E-26 |
| PRINTS |
Ribosomal_L7Ae/L8/Nhp2 (IPR018492) - T[33-47] 5.5E-21 - T[52-65] 5.5E-21 - T[68-78] 5.5E-21 - T[78-92] 5.5E-21 |
| ProSitePatterns |
Ribosomal_L7Ae_CS (IPR004037) - T[71-88] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NHP2_HUMAN | 39.167 % | 98.2 | 2.45E-27 |
| NH2L1_HUMAN | 80.488 % | 197 | 1.24E-66 |