Aniseed - Transcript Card

Transcript 'Phmamm.CG.MTP2014.S1...' >
Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S1.g00041.01.t

Possible name(s)

SURF4

Gene model

Phmamm.CG.MTP2014.S1.g00041

Location

S1 [464,707 / 470,110]

Sequences

Amino acid sequence

Length: 268

>Phmamm.CG.MTP2014.S1.g00041.01.p
MSSQATLLSKAEDAADNILRHTKYVLPHIGRFCLVSTFIEDGIRMWVQWGEQRDYIASTW
SCGTFIASLFVLINMLGQVGACTGVLLRKQVPIMCGVLFFIIGLQTIAYSILWDIKFLAR
NLALVGAVMLLLAESKSEARSLFAGVPQLDRNTPKSYMQLSGRVLLVLMFMTLLHFTANP
VDVVMDLLGIACILCVAVGFHAKICATVLVVGLMILNLSVNNFWSYSNIMNDFLKYDFFQ
VMSVIGGLLLMIEKGPGDISYDEYKKSM

Nucleotide sequence

Length: 1,371

>Phmamm.CG.MTP2014.S1.g00041.01.t
GCAAAAATAACGAGTTGATGTCAGTTAGCAAAAGCTCTGGGGTAAATTTTCGTATAGTAC
TTGTGTTACAGAGAATTTTTCTTTTTAAAAGTGAATTTCTAGTTGTTTGCTGGGCTCCGA
ATTGTGTTTTTCAACAAAATGGGTTATGTCCAATACAATAGATGAAAAATTGTAGGGTTG
TGATTAGTTGTTGTAAAGCCTCTAAACCTAAAAGTTTGCAATAGTATACGTTTATACTAA
TAAATTGAAACAATAACAATTTAAATTTTCATAAATTGAAGTGGTAAGAAAGTTGTAAAA
TTGTGCAGTAGATTTTGTATTGTATGTGCCAAGCAATTTTGTTTTGTTGTGTGCAGTAAT
AGGAAATTTTTACATAAGTTTGTGTATTGCATTATTTGTCACCTCTGCAATGTCCTCGCA
AGCCACACTTTTGAGCAAAGCAGAGGATGCTGCTGACAATATTTTAAGACACACAAAATA
TGTTCTTCCACATATTGGTCGCTTTTGTCTTGTTTCCACTTTTATCGAAGACGGAATTCG
TATGTGGGTGCAATGGGGCGAACAACGAGACTACATTGCCAGTACATGGAGCTGTGGCAC
TTTCATTGCCTCGTTATTTGTTTTAATTAACATGTTAGGTCAAGTTGGAGCATGCACTGG
AGTTCTGCTAAGAAAACAGGTTCCTATTATGTGTGGAGTATTATTTTTCATCATTGGACT
TCAAACTATTGCTTATAGCATTCTGTGGGACATCAAATTTTTGGCAAGAAACCTGGCCCT
CGTTGGAGCTGTTATGTTATTGCTTGCTGAAAGTAAGTCTGAGGCACGGTCCTTGTTTGC
TGGTGTACCCCAGTTGGATCGAAACACACCAAAGTCTTACATGCAACTCAGCGGCCGGGT
CTTGCTTGTTTTGATGTTTATGACACTGCTTCACTTCACTGCAAACCCTGTTGACGTTGT
TATGGACCTCCTGGGCATCGCTTGTATTCTCTGCGTTGCCGTCGGTTTCCATGCAAAAAT
CTGTGCCACTGTCCTTGTGGTTGGTTTGATGATCTTAAACCTGAGCGTCAACAACTTCTG
GTCCTACTCTAACATTATGAATGATTTCCTTAAATATGATTTCTTCCAGGTTATGTCTGT
GATTGGTGGACTTCTTTTGATGATAGAAAAGGGACCTGGCGATATTAGTTATGACGAATA
CAAGAAATCAATGTAAACTTCTATTTCCTAAATTACATACCTTTGTTTTTGACATTGTAA
TGTACACGAGTTTAATGTGATGTTGTAATGCTTTGGTCCAAATTTAACAGTTGGAAGTTG
ACAAAATCTGGGGTTGTTTCTAAGCTGCTGTTCTGTTTGCGCTTATTTGTA

InterProScan

Pfam	Surf4 (IPR002995) - T[7-267] 1.2E-100
ProSitePatterns	Surf4 (IPR002995) - T[235-249] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
SURF4_HUMAN	59.023 %	300	7.5E-103