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  1. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S1.g00021.02.t

Possible name(s)

ITIH4; VWA3A; VWA3B

Location

S1 [226,296 / 236,534]

Sequences

Amino acid sequence

Length: 878

>Phmamm.CG.MTP2014.S1.g00021.02.p
GLHPAGGCNLLKAFKKILKVKKLNSILIILGNCPDQTSNVLFDYIQQCLLGKKLPIHAVA
YDTSNHMTHETLRKLAECSNGRYHCFNSSDDREVYKSFDIQLLLREAQRSIDVISKIKQM
RTGMLGDALISIENEISMEVNRLSTARFLPRPPNHHRPLSIETPNFHPAPSSEWLAENGL
KARSLNLFQILAPNAFDPVQDFIPILRKSVGSKIHGQAMQQFEWHDGSVKNVHVDVAMLY
EYQKQLGSAVKAFEKRIEWLASGSRRIWGTICEKRVIFLVDTSISNKAYVIHIQHSLRLM
MEQQIANKEAFNIIAFGSHPKMWKPHMVKPSPENLQAAWRWVQNLEAFGSRNLLSAFRAS
IENEEDIKLYGGPQGLYLFTSGIPDQEEDVVCSFVSETCIGCELKIHCDLFSIDDYSVSE
SELPSRYATIQQTADYLRNLAHCSGGRFHWFRETGIVESDDIIMLTCEMDRAVYFSNRCS
QLVDSVKERDGLRREQMALKQLMLCDGPTTARKKRPETPKQVEFIEPRPTALTRARMSMQ
QEGDAPKALAWKVPNRKATLPSVPYGSVESSDANGQKATKSKKSPKSQQQPFYVEDKNNV
GVVYKKYPKQKSVRKAVPEPIFPQVEERISTKAWLKKYGINKLKLNLHRYVSGPVCIHEK
SKVKTAGSTITSKWFCSIFPSAEIDGEIRHIDMQESEMDDYELHVTSAIHRYLKRLQWLL
SGSRRLFGNILENNVVILIDISGSMSFYMEELKKEMTSLIWEQLNASKIAFNLISFSNAT
SSWQESVTETNETTCHDAVQWVSSLKPLGGTATLDALQVSILEWYCISVLRIPFKIKKQH
LHQKHRNRKLLPKPHCKKYANLKLTWVSMVEKAQQLHL

Nucleotide sequence

Length: 2,671

>Phmamm.CG.MTP2014.S1.g00021.02.t
CATGCAGACTGGAGGAAGCGCGAGATTTCATCCGAGGTCTGCATCCCGCTGGAGGTTGCA
ATCTTCTCAAAGCATTCAAGAAGATTCTGAAAGTCAAGAAGTTAAACTCGATTCTAATCA
TTCTTGGAAACTGTCCTGACCAGACCTCCAATGTGTTGTTCGATTACATCCAACAATGTT
TACTCGGTAAGAAACTTCCAATTCATGCTGTGGCGTACGATACGAGCAACCATATGACCC
ATGAGACACTAAGGAAACTGGCAGAATGCTCGAACGGTCGATACCACTGCTTCAATTCAT
CAGATGATAGAGAAGTTTACAAGAGTTTCGACATTCAGTTGTTGCTTCGTGAAGCTCAGC
GTTCAATCGACGTCATTTCAAAGATCAAACAAATGCGAACAGGAATGTTAGGGGATGCTT
TGATCAGTATTGAAAACGAGATTTCTATGGAAGTGAATAGACTTTCGACAGCGAGATTTT
TGCCCCGACCTCCAAACCACCATCGTCCACTCAGCATTGAAACTCCAAACTTTCATCCAG
CGCCCTCAAGTGAATGGCTTGCTGAAAATGGACTTAAAGCGAGAAGTTTAAATCTTTTTC
AGATCCTGGCACCCAACGCTTTTGACCCAGTACAAGATTTCATCCCAATCTTACGGAAGT
CGGTCGGATCTAAAATACATGGGCAGGCGATGCAACAGTTTGAGTGGCATGATGGAAGTG
TGAAAAATGTTCATGTTGATGTGGCTATGCTTTATGAATATCAGAAACAACTGGGATCGG
CAGTGAAGGCATTTGAAAAGCGAATCGAATGGCTCGCATCTGGAAGTCGAAGAATTTGGG
GAACAATTTGTGAAAAGCGTGTAATTTTTCTGGTCGACACCTCGATATCCAACAAAGCTT
ATGTTATTCACATCCAACATTCACTGAGACTGATGATGGAGCAACAAATCGCAAACAAGG
AGGCGTTCAACATCATTGCGTTTGGAAGTCATCCAAAGATGTGGAAACCTCATATGGTAA
AGCCATCCCCAGAAAACCTTCAAGCAGCATGGCGTTGGGTTCAGAACCTAGAAGCATTCG
GAAGTCGCAATCTGCTCTCTGCGTTCCGAGCTTCGATTGAGAATGAGGAGGACATTAAAC
TTTATGGTGGCCCACAAGGCTTGTACCTTTTTACCAGCGGCATCCCTGACCAAGAGGAGG
ATGTGGTTTGTTCATTTGTCAGTGAAACATGCATTGGATGCGAACTTAAAATCCACTGTG
ATTTGTTCAGCATCGACGATTACAGTGTTTCTGAATCTGAATTGCCCAGCAGATATGCCA
CAATTCAACAAACAGCTGACTATCTCCGCAACCTGGCTCACTGCAGTGGAGGTCGATTTC
ATTGGTTTCGTGAAACAGGAATTGTTGAAAGTGATGACATCATCATGTTGACATGTGAAA
TGGACCGAGCTGTTTATTTTTCCAACCGATGTTCACAACTGGTCGACTCTGTCAAGGAAA
GAGACGGGCTGAGAAGAGAACAGATGGCATTGAAACAACTGATGTTGTGTGATGGTCCCA
CCACTGCAAGAAAGAAAAGACCTGAAACTCCAAAACAAGTGGAATTTATCGAACCCAGAC
CGACAGCATTGACCAGAGCTAGAATGAGCATGCAACAAGAAGGAGATGCCCCAAAAGCAT
TAGCTTGGAAAGTACCAAACCGAAAGGCAACGTTGCCATCTGTACCTTATGGCTCAGTGG
AGAGTTCAGACGCCAATGGACAGAAAGCAACAAAAAGCAAGAAATCACCGAAATCACAGC
AGCAACCTTTCTATGTGGAAGACAAAAACAATGTCGGAGTTGTTTACAAGAAATATCCCA
AACAGAAAAGTGTGAGAAAAGCTGTCCCTGAACCAATATTCCCACAAGTTGAGGAAAGAA
TCAGCACAAAAGCGTGGTTGAAGAAATATGGAATCAACAAGTTGAAACTGAACCTACATC
GTTATGTGTCTGGACCTGTTTGTATTCATGAAAAATCAAAAGTCAAGACCGCCGGGTCAA
CCATCACGTCAAAATGGTTTTGTTCCATCTTTCCAAGTGCTGAAATCGATGGAGAAATCA
GACACATTGACATGCAGGAGAGCGAGATGGACGATTATGAGTTACATGTTACATCTGCAA
TACACAGATATCTTAAGAGGCTGCAGTGGTTGTTGTCTGGAAGCAGAAGACTATTCGGAA
ATATACTCGAAAACAACGTTGTCATTCTGATCGACATATCTGGCTCCATGAGTTTCTACA
TGGAGGAGCTAAAGAAGGAAATGACTTCGCTGATTTGGGAACAACTAAATGCCAGCAAGA
TAGCATTCAATCTTATTTCGTTCTCAAACGCAACCAGCAGTTGGCAGGAAAGTGTCACTG
AAACTAATGAGACAACATGTCATGACGCAGTACAGTGGGTGTCATCACTTAAACCACTCG
GGGGAACTGCTACTTTGGATGCATTGCAGGTCAGTATACTGGAATGGTATTGCATTTCAG
TTCTGCGGATTCCATTTAAGATTAAGAAGCAACACTTGCATCAAAAACACAGAAACAGGA
AACTGCTGCCAAAACCTCACTGTAAAAAATACGCTAATTTAAAACTAACATGGGTTTCAA
TGGTAGAAAAAGCACAGCAGCTGCACCTTGG

InterProScan

Pfam
VWF_A (IPR002035) - T[4-85] 8.3E-10 - T[275-425] 1.1E-12 - T[734-818] 1.6E-7
SUPERFAMILY
vWFA_dom_sf (IPR036465) - T[272-449] 2.97E-11 - T[733-819] 2.67E-12
Gene3D
vWFA_dom_sf (IPR036465) - T[273-459] 1.4E-6 - T[732-823] 5.3E-10

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
VWA3B_HUMAN 21.825 % 137 6.52E-33
VWA3A_HUMAN 43.773 % 701 0