- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S1.g00018.01.t
Possible name(s)
COL21A1; ITGA11; ITGAX
Gene model
Location
S1 [176,098 / 180,499]
Amino acid sequence
Length: 411
>Phmamm.CG.MTP2014.S1.g00018.01.p
MIALLLLMLWNVPNIWSYNVGIEEGASTSVNLSINIEKTSFAGYSLSVQNFDGNLSIVAG
APMYNSSKANGAIIQCADISGSEDDGYLNGNTSCWVKVDGNNLLLRDNQKQKADGFGTSL
VQLNSTQEYVSCGPGRQKICGPTGERSQFIPGSCYKGELSNMKMKQDWGEIDCFSNYIDV
VFLVDSSNSVTEADHVVIKEILKNITDSFSHSFGDTTQIAIVQYGTNVKDLKIDQPVGLG
ECDESQCYVEALDNRMDHLRGVDTLTAAAIQYVVQNVFATSSNRFLARQFLVVITDGQAT
DAADLTASFAMTQEANITVYAIGVGEDIDQDELNIIANGNTDNSLRVLTTEKYSELNQEL
ATVTAQLATFSTEGFSAVNVTITLENAMQGLSVQLSEQVKYGWGEWKHEWV
Nucleotide sequence
Length: 1,236
>Phmamm.CG.MTP2014.S1.g00018.01.t
ATGATCGCTTTGTTGCTTTTGATGTTGTGGAATGTTCCAAATATTTGGTCGTACAACGTT
GGAATTGAAGAAGGTGCAAGCACTTCCGTGAATTTAAGCATAAACATCGAAAAAACATCG
TTCGCTGGATACAGCTTGAGTGTTCAAAACTTCGACGGCAATTTAAGTATCGTGGCTGGA
GCTCCTATGTACAACAGTTCAAAAGCAAATGGAGCCATCATACAGTGTGCTGACATCAGT
GGGAGTGAGGACGATGGTTATTTAAATGGAAACACTAGCTGCTGGGTAAAAGTGGATGGA
AACAACTTGCTGTTAAGAGATAATCAGAAACAAAAGGCGGACGGGTTTGGAACCTCCCTT
GTGCAACTCAACTCAACCCAGGAATACGTGAGTTGCGGTCCTGGAAGACAGAAAATTTGC
GGTCCGACAGGTGAAAGGTCACAGTTCATACCGGGATCATGTTACAAGGGTGAGCTGAGC
AACATGAAAATGAAACAAGACTGGGGAGAGATAGACTGTTTTTCTAACTACATCGATGTG
GTTTTCCTGGTGGATAGCTCCAACTCAGTGACCGAAGCTGATCACGTCGTGATTAAAGAA
ATCTTAAAGAATATTACGGACAGCTTTTCTCACAGTTTTGGGGACACAACACAAATTGCT
ATTGTGCAGTACGGAACCAATGTAAAAGACTTGAAGATTGATCAACCAGTCGGTTTGGGC
GAGTGCGACGAATCGCAGTGTTACGTGGAAGCCCTAGACAACAGAATGGATCATTTGCGG
GGAGTGGACACTTTGACGGCTGCTGCTATACAGTATGTTGTACAGAATGTCTTTGCAACT
TCCAGCAACCGTTTTCTTGCGAGGCAGTTTCTTGTTGTGATTACTGATGGACAAGCCACA
GATGCGGCAGATTTGACTGCAAGCTTCGCAATGACCCAGGAAGCTAATATAACGGTGTAC
GCTATTGGTGTTGGGGAAGACATAGACCAGGACGAGCTTAATATCATTGCTAACGGAAAC
ACAGACAACAGTTTACGGGTTTTGACCACCGAGAAATATTCGGAACTCAACCAAGAGCTT
GCTACGGTCACAGCACAGTTAGCCACCTTCTCAACTGAAGGCTTTTCTGCTGTAAATGTG
ACTATTACCCTCGAAAATGCAATGCAAGGACTTTCTGTTCAACTATCAGAACAGGTAAAG
TATGGGTGGGGGGAATGGAAACACGAATGGGTGTGA
| Gene3D |
Integrin_alpha_N (IPR028994) - T[42-380] 4.3E-45 |
| SUPERFAMILY |
vWFA_dom_sf (IPR036465) - T[173-358] 1.75E-32 |
| Gene3D |
vWFA_dom_sf (IPR036465) - T[174-367] 4.3E-45 |
| SMART |
VWF_A (IPR002035) - T[177-365] 6.5E-25 |
| ProSiteProfiles |
VWF_A (IPR002035) - T[179-367] 25.363 |
| Pfam |
VWF_A (IPR002035) - T[179-355] 9.9E-28 |
| Protein Name | Identity | Bit Score | e-value |
|---|
