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  1. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S1.g00010.01.t

Possible name(s)

ACSF2; ACSF3; ACSL1

Location

S1 [58,255 / 62,868]

Sequences

Amino acid sequence

Length: 544

>Phmamm.CG.MTP2014.S1.g00010.01.p
MPLRSPMPDLVIPNVSFGDYMFSNLARSKNKVTVIDSSNNDNQYTSQEVRENSMKCGSAF
YRMGLMKGDVVATCLTNCAEYTFIVMGVNACGGILTTSNPNYTKDELSFQFKQSEPKFVF
CNSENYVKVQEVCAEINSVKEIFNMEEQPNRKTFSQFLAKGNSKDFPLGVSVDPDDVALI
LYSSGTTGLPKGVMLTHRNLVSIFTEYEGSFRLSRLDVVYLVLPMFHIFGILMSFLVLSQ
GAKVVLKKRFDFMQILGDIQKYKITAIPVIPPIIVGMDQLPSKHGFDISSLRELCSGAAP
LAESVALSVSKKFNVNITQVWGLTEGTPGTRHMDVYTPVLSIGSVAPNTLLKIIGTDNGR
ELGPNEDGEICIKGPQLMKGYYKNPEATAKTIDSEGWLHTGDIGHYDDNEFIYIVDRLKE
LIKYKGFQVAPAELEDVLLRHPKITDVGVIGVPDPKAGELPKAYVVRKDPTLTEKEIHEF
MKGYYKNPEATAKTIDSEGWLHTGDIGHYDDNEFIYIVDRLKELIKYKGFQVGFRVNPQE
QHVT

Nucleotide sequence

Length: 1,635

>Phmamm.CG.MTP2014.S1.g00010.01.t
ATGCCGCTTCGAAGTCCAATGCCTGATTTAGTAATTCCTAATGTCAGTTTTGGTGATTAT
ATGTTTTCGAATCTCGCTAGAAGCAAAAACAAGGTTACTGTGATTGACAGTTCAAACAAT
GACAACCAGTACACGTCCCAGGAAGTACGTGAGAACTCCATGAAATGTGGGAGCGCATTT
TACCGCATGGGGTTGATGAAGGGTGATGTGGTGGCAACTTGTCTCACAAACTGTGCCGAA
TACACATTCATAGTGATGGGAGTGAATGCATGCGGTGGAATACTTACTACGTCAAACCCA
AACTACACCAAAGATGAACTTTCATTCCAATTCAAACAATCCGAACCTAAATTTGTTTTC
TGCAATTCTGAGAACTACGTCAAAGTACAAGAAGTTTGTGCGGAAATAAATTCGGTTAAG
GAAATATTTAACATGGAAGAACAACCAAATCGAAAAACATTTTCCCAATTTCTTGCCAAG
GGAAATTCCAAAGACTTTCCTCTTGGCGTTTCTGTCGACCCGGACGATGTGGCTTTAATC
CTCTACTCCAGCGGAACCACTGGGCTTCCTAAGGGTGTGATGCTTACACACAGAAACTTG
GTTTCAATTTTTACCGAATACGAGGGCTCGTTCCGCCTTTCACGTCTTGATGTCGTCTAC
TTGGTTCTTCCCATGTTCCACATCTTTGGGATTTTGATGTCATTTCTGGTGTTATCGCAA
GGAGCTAAAGTTGTTCTTAAGAAACGATTTGACTTCATGCAAATTTTGGGAGACATTCAG
AAATATAAGATCACCGCCATTCCTGTAATCCCACCCATTATAGTAGGAATGGACCAACTT
CCATCAAAGCATGGATTCGATATTTCATCTTTACGAGAACTTTGCTCTGGTGCTGCTCCT
TTAGCTGAAAGTGTGGCGTTGTCTGTGTCCAAGAAATTTAACGTCAACATTACGCAAGTT
TGGGGTTTGACTGAGGGAACACCTGGGACTCGACACATGGACGTTTATACTCCCGTACTG
TCAATTGGAAGCGTCGCACCAAATACTTTGTTGAAGATTATTGGTACAGACAACGGAAGG
GAACTGGGTCCTAATGAAGACGGTGAAATTTGCATTAAAGGCCCACAGTTGATGAAAGGT
TATTACAAGAACCCTGAAGCGACAGCAAAGACGATTGACAGTGAAGGCTGGTTACATACA
GGAGATATCGGACATTACGATGATAACGAGTTTATCTATATCGTTGATCGACTGAAAGAG
CTGATAAAGTACAAAGGATTTCAAGTGGCACCCGCTGAACTAGAAGACGTATTGTTACGT
CATCCAAAGATTACTGACGTAGGAGTTATCGGTGTTCCCGATCCCAAAGCAGGGGAATTA
CCCAAAGCTTATGTTGTCAGAAAAGATCCAACTCTCACAGAAAAAGAAATTCACGAATTC
ATGAAAGGTTATTACAAGAACCCTGAAGCGACAGCAAAGACGATTGACAGTGAAGGCTGG
TTACATACAGGAGATATCGGACATTACGATGATAACGAGTTTATCTATATCGTTGATCGA
CTGAAAGAGCTGATAAAGTACAAAGGATTTCAAGTTGGCTTTCGTGTCAATCCGCAAGAA
CAACATGTCACATGA

InterProScan

Pfam
AMP-dep_Synth/Lig (IPR000873) - T[25-424] 1.5E-100 - T[480-527] 1.0E-16
ProSitePatterns
AMP-binding_CS (IPR020845) - T[180-191] .
Pfam
AMP-bd_C (IPR025110) - T[433-521] 6.5E-11

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ACSF2_HUMAN 26.122 % 154 3.39E-40
ACSL1_HUMAN 27.692 % 135 7.49E-34
ACSF3_HUMAN 25.536 % 132 6.52E-33