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  1. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S1.g00009.01.t

Possible name(s)

ACSF2; ACSF3; ACSL6

Location

S1 [49,607 / 57,109]

Sequences

Amino acid sequence

Length: 763

>Phmamm.CG.MTP2014.S1.g00009.01.p
MPLRSPMSDLVIPNISFSDYMLSNLVRKGNKVTMIDSSNNDNQYTSQEVRIVAVIADELL
FQLKQAEPKFVFCNSENYVKVQQVCAQMSSVKRIINMEDEPEYETFSQFLAKGNSKDFPL
GVSVDPDDVALIIYSSGTTGLPKGVMLTHRNLIATLTICEASFFWSRLDIVYLVTPMFHL
YGITILFLVLMKGSKIVIKQRFDSKQMLKDIMKYKISRLIATPPIILAIHQLSQEHDVSS
LQEIDCSAAPLPESVALSVSEKLNVKIKQVWGLTEAAPGTRHMDLNTPVLSIGNVTPNTM
IKIIDTDNGKELGPNEDGEICYKGPQVMKGYYKNPEATAKTIDSEGWLHTGDIGHYDDNE
FIYVVDRLKELIKYKGFQVAPAELEDVLLRHPKITDVGVIGVPDPKAGELPKAYVVKKDR
DLTEKEIHDFMKDELSFQFKQTEPKFVFCDLANYLKVQEVCAQLHSVKEIFNMEAEPNKK
TFSQFLVHGNSKDFPFDVSVDPDDVALILYSSGTTGLPKGFMLTHRNLVASLTIGDASMR
WSRIDAIYLVLPMFHVYGTIMSLLVMSKGSKVVLKKRYDLMQMMGDIQKYKIVDTNSGRE
LGPNEDGEICIKGPQVMKGYHKNPEATAKTIDSGGWLHTGDIGHYDDNEFIYIVDRLKEL
IKYKGFQVAPAELEDVLLRHPKIADVGVIGVPDLEAGELPKAYVVRKHPTLTEKEIHEFI
KDKVTKFKYLRGGITFIDVIPKSPSGKKLRRLLKDMEKKTSKY

Nucleotide sequence

Length: 2,292

>Phmamm.CG.MTP2014.S1.g00009.01.t
ATGCCGCTTCGAAGTCCAATGTCGGATTTGGTAATTCCTAATATCAGTTTTAGTGATTAC
ATGTTGTCGAATCTCGTAAGAAAAGGAAACAAGGTTACCATGATTGACAGTTCAAACAAT
GACAACCAGTACACGTCCCAGGAAGTACGTATTGTTGCTGTAATTGCAGATGAACTTTTA
TTCCAGTTGAAACAAGCCGAACCCAAATTTGTTTTCTGCAATTCTGAGAACTACGTCAAA
GTACAACAAGTTTGTGCACAAATGAGTTCGGTTAAAAGAATAATTAACATGGAAGACGAA
CCTGAATATGAAACATTTTCCCAGTTTCTTGCAAAGGGAAATTCCAAAGACTTTCCTCTT
GGCGTTTCTGTCGACCCGGATGATGTGGCTTTAATCATTTACTCCAGCGGAACCACTGGG
CTTCCTAAGGGTGTAATGCTCACGCATAGAAACTTGATTGCAACTTTAACCATCTGCGAA
GCCTCGTTTTTTTGGTCTCGTCTCGATATCGTTTACTTGGTTACTCCTATGTTTCATCTC
TACGGCATCACTATTCTCTTTCTGGTTTTAATGAAAGGAAGCAAAATTGTCATCAAGCAA
CGATTCGACTCGAAGCAGATGTTGAAAGACATTATGAAATACAAGATTTCGCGCTTGATT
GCAACACCTCCCATCATACTAGCAATACATCAACTTTCACAAGAGCATGATGTTTCATCT
TTACAAGAAATTGACTGCAGTGCTGCGCCATTGCCTGAAAGTGTGGCGTTGTCGGTCTCT
GAAAAACTTAACGTTAAAATAAAACAAGTTTGGGGATTAACAGAGGCAGCACCTGGGACT
CGACACATGGATCTTAATACTCCCGTTCTCTCAATTGGAAACGTCACACCCAACACTATG
ATAAAGATTATTGATACAGACAACGGAAAGGAACTAGGTCCTAATGAAGACGGTGAAATT
TGCTACAAAGGCCCACAGGTTATGAAAGGTTATTACAAGAACCCTGAAGCGACAGCAAAG
ACGATTGACAGCGAAGGCTGGTTACATACAGGAGATATCGGACATTACGATGATAACGAG
TTTATCTATGTCGTTGATCGATTGAAAGAGCTGATAAAGTACAAAGGATTTCAAGTGGCA
CCAGCTGAGTTGGAAGACGTATTGTTACGTCATCCCAAGATTACTGACGTAGGAGTCATT
GGTGTTCCCGATCCTAAAGCAGGGGAATTACCCAAAGCTTACGTTGTCAAAAAAGATCGA
GATCTCACAGAGAAAGAAATTCACGATTTCATGAAAGATGAACTTTCCTTCCAGTTCAAA
CAAACCGAACCCAAATTTGTTTTCTGCGATTTGGCGAACTACCTTAAAGTTCAAGAAGTT
TGTGCACAGCTTCACTCCGTTAAAGAAATATTTAACATGGAAGCCGAACCCAACAAAAAA
ACATTCTCTCAATTTCTCGTTCATGGAAATTCTAAAGACTTTCCTTTCGATGTTTCTGTC
GACCCGGACGATGTGGCTTTAATCCTCTACTCCAGTGGAACCACTGGGCTTCCTAAGGGC
TTTATGCTTACACACAGAAACTTGGTTGCAAGTTTGACCATTGGCGATGCATCAATGCGC
TGGTCTCGCATCGACGCAATCTACCTGGTTCTTCCCATGTTTCATGTTTACGGAACCATA
ATGTCGCTCCTGGTTATGTCAAAAGGAAGCAAAGTTGTTCTTAAGAAACGTTACGACTTG
ATGCAAATGATGGGAGATATTCAGAAATACAAGATTGTTGATACAAACAGTGGAAGAGAA
CTAGGTCCTAACGAAGACGGTGAAATTTGCATTAAAGGCCCACAGGTCATGAAAGGTTAT
CACAAGAACCCTGAAGCGACAGCAAAGACGATTGACAGTGGAGGCTGGTTACATACTGGA
GATATCGGACATTACGATGATAACGAGTTTATCTACATCGTTGATCGACTGAAAGAGCTG
ATAAAGTACAAAGGATTCCAAGTGGCACCAGCTGAATTGGAAGACGTATTGTTACGTCAT
CCAAAGATCGCTGACGTAGGAGTCATTGGTGTTCCCGATCTCGAAGCAGGGGAATTACCC
AAAGCTTATGTTGTCAGAAAACATCCAACTCTCACAGAAAAAGAAATCCATGAGTTTATC
AAAGACAAAGTTACAAAATTTAAGTATCTTCGTGGGGGAATCACCTTTATTGACGTCATA
CCCAAGTCTCCTAGCGGAAAAAAATTGCGTCGACTTTTGAAAGATATGGAAAAGAAAACA
TCGAAATATTGA

InterProScan

Pfam
AMP-dep_Synth/Lig (IPR000873) - T[56-374] 8.1E-80 - T[589-663] 7.2E-28
ProSitePatterns
AMP-binding_CS (IPR020845) - T[132-143] . - T[508-519] .
Pfam
AMP-bd_C (IPR025110) - T[383-437] 9.7E-11 - T[672-747] 2.5E-14

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ACSF2_HUMAN 30.267 % 142 1.41E-35
ACSL6_HUMAN 27.507 % 119 6.44E-28
ACSF3_HUMAN 26.989 % 130 8.57E-32