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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S1.g00005.01.t

Possible name(s)

SLCO4A1; SLCO4C1; SLCO5A1

Gene model

Phmamm.CG.MTP2014.S1.g00005

Location

S1 [24,551 / 30,556]

Sequences

Amino acid sequence

Length: 397

>Phmamm.CG.MTP2014.S1.g00005.01.p
MKTDDEVSLDETCGFQFGCTKSTTKRFPTRIFQCCATPIGALVVISLGGFLQGLIVNGLV
NASITTLETRFQLGSAEAGLIASCYDISQCVTLLFVTYVGGRGHKPLWLGWGFVLMGIGS
IVFSLPKFMAPPYEVASVTEGTCNNSTLLSDCSNTALRSYRYAFYVAMLLIGLGATGIYT
LGVTYLDENVKQVKSSLYHGVYYAVALIGPGIGFLLAGTFLGFYTDLGVEFRDFPKCLAS
ILRNPSFIFLSLAAATESCLLTGISTFGAKVNESLFKLTASNAAFAVGLVAILSGATGQF
FGGLIVTKAKLSVRQILTYCMGMTLLAMICLLIFLQTCPNGGLVAILSGATGQFFGGLIV
TKAKLSVRQILTYCMGMTLLAMICLLIFLQTCPNGGE

Nucleotide sequence

Length: 1,194

>Phmamm.CG.MTP2014.S1.g00005.01.t
ATGAAAACTGATGATGAAGTCAGTTTAGATGAAACATGTGGATTTCAATTTGGATGCACT
AAGTCTACTACAAAAAGATTTCCCACTCGAATATTCCAATGTTGTGCAACGCCAATAGGA
GCCTTGGTGGTAATCAGCCTCGGTGGTTTCTTGCAAGGATTGATTGTAAATGGACTTGTC
AATGCTTCTATCACCACTCTTGAAACAAGATTCCAACTTGGCAGTGCAGAGGCTGGACTT
ATTGCAAGTTGTTATGACATTTCACAATGTGTAACCTTGCTTTTTGTCACATATGTTGGA
GGAAGAGGGCACAAACCACTTTGGCTTGGCTGGGGTTTTGTCCTCATGGGGATTGGTTCC
ATTGTGTTTTCATTACCTAAATTTATGGCCCCACCTTACGAAGTTGCAAGTGTCACTGAG
GGAACTTGTAACAACTCAACATTGCTTTCTGACTGTTCAAACACAGCATTAAGAAGCTAC
AGGTATGCATTTTATGTTGCCATGCTATTAATTGGTCTGGGTGCAACTGGAATTTACACG
CTTGGTGTAACGTACCTTGATGAAAATGTAAAGCAAGTCAAGTCATCTTTATACCATGGT
GTCTACTATGCAGTTGCCTTAATCGGACCTGGAATTGGGTTTTTATTGGCAGGAACTTTT
CTTGGCTTTTATACAGACTTAGGAGTAGAATTCCGAGACTTTCCAAAATGCTTAGCAAGT
ATTCTTCGCAATCCATCGTTCATTTTTTTGTCGCTTGCTGCAGCAACAGAGTCTTGCCTG
CTTACTGGCATTTCAACATTTGGAGCAAAAGTAAATGAATCCCTCTTCAAATTAACAGCC
TCCAATGCAGCTTTTGCTGTTGGTTTGGTTGCAATATTAAGTGGTGCTACTGGTCAATTT
TTCGGAGGTCTTATTGTTACAAAAGCCAAGTTATCAGTGCGACAGATTCTGACTTACTGT
ATGGGAATGACACTTCTTGCTATGATCTGTCTCCTAATATTTCTTCAAACATGCCCCAAC
GGAGGTTTGGTTGCAATATTAAGCGGTGCTACTGGTCAATTTTTCGGAGGTCTTATTGTT
ACAAAAGCAAAGTTGTCAGTGCGACAAATTCTGACTTACTGTATGGGAATGACACTTCTC
GCTATGATCTGTCTCCTCATATTTCTTCAAACATGCCCCAATGGAGGTGAGTAA

InterProScan

PANTHER
OATP (IPR004156) - T[23-229] 3.5E-103 - T[230-343] 3.5E-103 - T[342-395] 3.5E-103
SUPERFAMILY
MFS_trans_sf (IPR036259) - T[40-388] 1.7E-19
Pfam
OATP (IPR004156) - T[42-227] 1.1E-56 - T[230-341] 7.5E-24 - T[342-394] 8.4E-7
CDD
MFS_dom (IPR020846) - T[42-382] 2.54344E-5

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SO4A1_HUMAN 47.805 % 186 1.06E-52
SO4C1_HUMAN 42.995 % 155 1.31E-41
SO5A1_HUMAN 42.932 % 146 2.03E-38