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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S19.g00813.01.t

Possible name(s)

MIEN1; SELENOT

Gene model

Phmamm.CG.MTP2014.S19.g00813

Location

S19 [286,691 / 287,264]

Sequences

Amino acid sequence

Length: 156

>Phmamm.CG.MTP2014.S19.g00813.01.p
MITWRDLSGNTEVDAKMDNDDSPVPKLKRVKIDGGNYPPPQINQAIASFLSLAKFILIGC
ILTGVNPFERFGLDTPQIYIWCRENMIYACFMLFFLTNAIETQLTSTGAFEISLNDVTIW
SKLQSGRVPRVDELMQIIDSHISGGNINANEQFKVQ

Nucleotide sequence

Length: 471

>Phmamm.CG.MTP2014.S19.g00813.01.t
ATGATAACTTGGAGGGACCTGTCAGGAAACACAGAAGTTGATGCGAAAATGGATAATGAT
GATTCTCCTGTTCCAAAGCTTAAAAGGGTCAAGATCGACGGGGGTAACTACCCACCTCCT
CAGATCAACCAAGCCATTGCTTCATTTTTGTCTCTTGCGAAATTTATTTTAATTGGTTGT
ATTTTGACTGGAGTAAATCCATTCGAACGATTTGGATTGGACACCCCTCAGATCTATATT
TGGTGTCGTGAAAATATGATATATGCCTGTTTTATGCTGTTTTTCCTTACCAATGCCATA
GAAACTCAACTTACATCAACTGGTGCATTTGAAATATCATTGAACGATGTCACCATTTGG
TCAAAGCTTCAATCTGGAAGAGTTCCAAGAGTAGATGAACTGATGCAGATCATTGACTCT
CACATCAGTGGTGGAAATATCAATGCCAACGAGCAGTTCAAAGTGCAATAA

InterProScan

PANTHER
Selenoprotein_T (IPR019389) - T[30-143] 2.2E-48
TIGRFAM
Selenoprotein_Rdx-typ (IPR011893) - T[30-139] 5.5E-14
SUPERFAMILY
Thioredoxin-like_sf (IPR036249) - T[87-143] 4.47E-10
Pfam
Selenoprotein_Rdx-typ (IPR011893) - T[98-139] 4.9E-10

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SELT_HUMAN 53.097 % 133 4.41E-40