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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S1...' > 
  2. Transcript 'KH2012:KH.C5.392.v1....' > 
  3. Transcript 'Cisavi.CG.ENS81.R54....' > 
  4. Transcript 'Phmamm.CG.MTP2014.S6...' > 
  5. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S199.g05206.01.t

Possible name(s)

VAMP1; VAMP2; VAMP3

Gene model

Phmamm.CG.MTP2014.S199.g05206

Location

S199 [107,996 / 109,612]

Sequences

Amino acid sequence

Length: 104

>Phmamm.CG.MTP2014.S199.g05206.01.p
MSGYEPVPDPRSYGGTANYGGGPAAPGGGAAASKKLQQTQAQVDDVVGIMRTNVDKVLER
DQKLSELDDRADALQQGASQFETQAAKLKRKYWWKNCKVSDGIS

Nucleotide sequence

Length: 315

>Phmamm.CG.MTP2014.S199.g05206.01.t
ATGTCAGGATATGAGCCTGTGCCAGACCCAAGGTCATACGGAGGAACAGCTAACTATGGA
GGTGGTCCAGCTGCCCCAGGTGGAGGTGCTGCTGCTTCAAAGAAGTTACAACAAACCCAA
GCTCAAGTTGACGATGTTGTTGGTATTATGAGAACAAATGTCGATAAAGTACTGGAAAGA
GATCAAAAACTCTCAGAGCTGGACGACAGAGCTGATGCACTGCAACAAGGTGCTTCCCAA
TTTGAAACACAGGCCGCCAAACTTAAGCGAAAGTATTGGTGGAAAAACTGCAAGGTAAGT
GATGGCATATCCTGA

InterProScan

Pfam
Synaptobrevin (IPR001388) - T[33-99] 1.2E-26
ProSiteProfiles
Synaptobrevin (IPR001388) - T[35-95] 18.683
PRINTS
Synaptobrevin (IPR001388) - T[40-59] 6.2E-19 - T[60-79] 6.2E-19
ProSitePatterns
Synaptobrevin (IPR001388) - T[53-72] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
VAMP3_HUMAN 78.205 % 125 7.95E-39
VAMP2_HUMAN 80.282 % 121 3.77E-37
VAMP1_HUMAN 80.882 % 119 1.79E-36