Aniseed - Transcript Card

Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S199.g05198.02.t

Possible name(s)

FAM213A; FAM213B

Gene model

Phmamm.CG.MTP2014.S199.g05198

Location

S199 [24,155 / 28,219]

Sequences

Amino acid sequence

Length: 305

>Phmamm.CG.MTP2014.S199.g05198.02.p
MSPQTQGSDEFLKSKLFSGELYIDEKKKCYKDLEYQQYSFFGALMALKDKDTQFLSQKAK
EEGISGDIRGDWYQMGGLLVIRKGGEVLLNFKQQKGSDHVENPEILKALGIDAAFEEASD
KPAEEVQLKSFWANNDVVIYFLRRYGCPVCRWLAKNISRLQPIFDSNNVKLVGISPQTKG
SDEFLESKLFSGELYIDEQKKCYKDLDYQQYSFVGALMAVKDKDTQLINQKAKKEGISGN
LKGDLYQMGGLLVIRKGGEILLNFKQQKGSDHVENPEILKALGIDAELEAANDKPAECDA
AACSM

Nucleotide sequence

Length: 918

>Phmamm.CG.MTP2014.S199.g05198.02.t
ATGAGCCCACAGACACAGGGATCAGATGAATTTTTGAAGTCAAAACTATTCTCTGGAGAA
CTGTATATTGATGAGAAGAAGAAATGTTACAAAGATCTAGAATACCAGCAATATTCATTT
TTTGGTGCTTTAATGGCACTAAAAGACAAGGACACTCAGTTTTTGAGTCAAAAAGCTAAG
GAGGAGGGTATAAGTGGTGATATCAGGGGTGACTGGTATCAAATGGGTGGCCTACTTGTA
ATTAGGAAAGGAGGAGAAGTGTTGTTAAATTTCAAGCAACAAAAGGGCAGTGATCATGTG
GAAAATCCAGAAATCTTAAAAGCACTTGGTATTGATGCTGCATTTGAAGAGGCTAGTGAC
AAACCAGCAGAAGAAGTACAGTTAAAAAGCTTCTGGGCCAACAATGATGTCGTCATATAT
TTCCTCAGAAGATATGGCTGCCCTGTGTGTAGATGGTTAGCGAAAAATATAAGCAGATTA
CAGCCAATATTTGATTCCAACAATGTGAAGCTGGTTGGTATAAGCCCACAGACGAAGGGA
TCAGATGAATTTTTAGAATCAAAACTATTTTCTGGAGAACTGTATATTGATGAGCAGAAG
AAATGTTACAAAGATCTAGATTATCAGCAATATTCATTTGTGGGTGCTTTAATGGCCGTT
AAAGACAAAGACACCCAATTGATAAACCAAAAAGCAAAGAAAGAGGGTATTAGCGGTAAT
CTGAAGGGTGACTTGTATCAGATGGGAGGTTTACTTGTAATTAGAAAAGGGGGAGAAATC
TTGTTAAACTTCAAGCAACAAAAGGGCAGTGATCATGTGGAAAACCCAGAAATCCTAAAA
GCGCTTGGTATTGATGCTGAATTGGAAGCGGCCAATGACAAACCAGCTGAATGTGATGCA
GCTGCCTGTTCCATGTAA

InterProScan

PANTHER	FAM213/AAED1 (IPR032801) - T[3-114] 1.1E-96 - T[123-304] 1.1E-96
Pfam	FAM213/AAED1 (IPR032801) - T[8-94] 2.8E-10 - T[157-267] 7.4E-16
ProSiteProfiles	Thioredoxin_domain (IPR013766) - T[107-233] 8.597
SUPERFAMILY	Thioredoxin-like_sf (IPR036249) - T[124-208] 6.85E-10

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
PGFS_HUMAN	45.198 %	162	3.21E-49