Aniseed - Transcript Card

Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S197.g05165.01.t

Possible name(s)

ARL6IP5; RABAC1

Gene model

Phmamm.CG.MTP2014.S197.g05165

Location

S197 [1,135 / 2,489]

Sequences

Amino acid sequence

Length: 185

>Phmamm.CG.MTP2014.S197.g05165.01.p
MTDTESTANDFGNISGKMIKVDPPAVRDWVNKRRQTIQPWSEFINTTKFRKPTSAANLSK
RAVKNIQHYQTNYIFVFTGLIVYCIITSPLLLIAIGVFLGACYIIHVKNEQQNIKVFGQC
HEFSHAQQYAIAAAFSFPLFFIAGAGAAVFWVLGVSLVLIAIHASLHISPEEGTAEDEQP
FMETV

Nucleotide sequence

Length: 789

>Phmamm.CG.MTP2014.S197.g05165.01.t
CAATGACTGATACAGAATCAACTGCCAATGATTTTGGCAACATTTCAGGAAAGATGATCA
AAGTTGACCCCCCTGCAGTTCGTGATTGGGTAAACAAGCGAAGACAAACCATTCAACCAT
GGTCTGAGTTCATCAATACCACCAAGTTTCGCAAGCCAACCAGTGCTGCAAACTTGTCCA
AAAGAGCTGTGAAAAACATCCAGCATTATCAAACAAACTACATTTTTGTGTTCACAGGCT
TAATTGTTTATTGCATTATTACTTCACCTCTTCTGTTGATTGCTATTGGAGTATTCTTGG
GAGCCTGTTACATAATTCATGTCAAAAACGAACAGCAAAATATCAAGGTTTTCGGTCAGT
GCCATGAATTTTCCCATGCCCAGCAGTATGCTATTGCTGCAGCATTTTCATTTCCACTCT
TTTTCATTGCTGGAGCAGGAGCTGCAGTATTTTGGGTGTTGGGAGTTTCATTGGTACTTA
TTGCTATTCATGCATCATTACACATATCACCAGAGGAAGGGACTGCAGAAGATGAACAGC
CATTCATGGAAACTGTGTAACTCCTGAAAGTATTAATTTTTGTAACATTATTGTTCACTA
GTGATTTTGCTCTCAATTAGGTGCTTTTCCATTACTTTAAAGCATCATTACAAACATATT
ATACATTTGAGTGTTAAAACTGACAAATGTTCATTTTATGAAGCTGGTTATGTAAACCTT
AATAAAGATTTCAGTATCTGATGTCTGAAATTACTGTAATAATGTTACAAATACTGTGAA
AAAATGAAG

InterProScan

PANTHER	Prenylated_rab_accept_PRA1 (IPR004895) - T[8-180] 1.0E-51
Pfam	Prenylated_rab_accept_PRA1 (IPR004895) - T[34-170] 8.2E-36

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
PRAF1_HUMAN	50.35 %	174	6.9E-56