Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Region 'REG00000235'
  2. Transcript 'Harore.CG.MTP2014.S1...'
  3. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S1944.g15944.01.t

Possible name(s)

BIRC6; UBE2O; UBE2Z

Location

S1944 [19,453 / 23,477]

Sequences

Amino acid sequence

Length: 526

>Phmamm.CG.MTP2014.S1944.g15944.01.p
MSVYEVSDHPDFNFRISDILVRLSSPSEAEHTSGDAAIGELLRVTPDGKLHVKWCDGSIT
DVHPHELMRVGSDEDGEDFWNSPDMSDVDSEDSDSSGWEMAGSDGEEWPRGPVSVPSPKT
PWKPQKRPNQCLTGLTVRRFELMRVGSDDDGEEFWNSPDMSDLDSEDSDSSGWEMAGSDE
EDWPRVPESKPSPKTPGKAPKTPEPVSHGIESSEIRERKVADQSAVDVTAHVTSTLDSEP
SVEEKPNTSARGDELDDFPSFSSEATAPKSHHYRTHTFVVSDQKSFMKALRRDIKQFKND
LPEGIYVKVFEDRMDLLSALFVGPENTPYEDGVFAFDIQLPGDYPASPPRFHYISYSHRL
NPNLYEDGKVCVSLLGTWMGKGNEKWTRDSNLLQVLVSIQGLILNSEPYYNEAGYEGHRG
TTEGQKNSRCYNEMVILRLVEHMSALVFSPPRPFQALCRHMCPTHTSKLISRVEALLHHN
DGGSLAVDPNLPYPLLPLSKGVVMSLKQKLAHLVKTAASVVEQQTS

Nucleotide sequence

Length: 1,581

>Phmamm.CG.MTP2014.S1944.g15944.01.t
ATGAGTGTGTACGAAGTATCAGACCATCCCGATTTTAACTTTCGTATCTCGGATATTCTG
GTTCGACTTTCGAGTCCGTCTGAAGCTGAACACACGAGCGGGGATGCAGCGATAGGAGAA
TTACTACGTGTTACACCAGATGGAAAACTCCACGTTAAATGGTGCGACGGTTCAATTACA
GATGTCCATCCACACGAACTCATGCGTGTCGGGTCAGACGAAGACGGTGAAGATTTTTGG
AATTCCCCCGATATGAGTGACGTGGATTCGGAGGATTCGGATAGCAGCGGGTGGGAGATG
GCCGGATCCGATGGGGAGGAGTGGCCTCGGGGACCCGTATCGGTGCCCAGCCCCAAAACT
CCCTGGAAACCCCAAAAACGCCCGAACCAGTGCCTCACGGGATTGACAGTTCGGAGATTC
GAACTCATGCGTGTCGGATCAGATGATGACGGCGAAGAGTTTTGGAATTCCCCGGATATG
AGTGACTTGGATTCGGAGGATTCGGATAGCAGTGGATGGGAGATGGCAGGATCCGATGAG
GAGGATTGGCCCCGGGTACCTGAATCGAAGCCAAGCCCCAAAACTCCCGGGAAAGCCCCC
AAAACGCCCGAGCCAGTGTCCCACGGAATCGAAAGTTCGGAAATTCGTGAGAGAAAAGTC
GCAGACCAATCAGCGGTCGATGTTACTGCTCACGTGACCTCTACATTGGATAGCGAACCT
AGTGTTGAGGAAAAACCGAATACTTCAGCACGTGGAGATGAATTAGATGATTTTCCTAGT
TTTTCGAGTGAAGCCACAGCTCCCAAATCTCATCATTACCGTACACATACCTTCGTGGTA
TCCGATCAAAAGTCCTTCATGAAAGCACTCAGGCGTGACATCAAACAATTTAAAAACGAT
CTGCCTGAAGGGATTTACGTGAAAGTCTTCGAAGACAGAATGGACTTATTATCTGCTTTA
TTTGTTGGACCGGAAAACACCCCATATGAGGATGGAGTATTTGCCTTCGATATCCAGCTT
CCTGGGGATTACCCTGCAAGCCCCCCTCGTTTCCACTATATATCCTACTCACATAGACTT
AATCCGAACCTGTACGAGGACGGGAAAGTTTGTGTGAGTTTGCTGGGAACATGGATGGGG
AAGGGCAACGAGAAATGGACAAGAGACTCCAATTTACTTCAGGTTTTAGTGTCAATTCAA
GGTCTTATTCTTAACTCTGAGCCGTATTACAACGAAGCCGGCTATGAAGGTCATAGAGGA
ACGACTGAAGGTCAAAAGAACAGCAGATGCTACAACGAAATGGTGATTCTACGTCTTGTG
GAGCACATGTCAGCCTTGGTCTTTTCACCACCTCGACCTTTTCAAGCTCTCTGCCGCCAC
ATGTGTCCAACCCACACCAGCAAGTTGATAAGCAGAGTCGAAGCATTGTTGCATCACAAT
GACGGTGGTTCTTTAGCTGTTGATCCTAACCTTCCCTACCCATTGTTGCCGCTATCCAAG
GGGGTAGTAATGAGTCTAAAACAAAAATTAGCCCATCTTGTGAAAACGGCTGCTTCTGTT
GTAGAACAACAAACCAGTTGA

InterProScan

Gene3D
UBQ-conjugating_enzyme/RWD (IPR016135) - T[245-490] 4.2E-69
SUPERFAMILY
UBQ-conjugating_enzyme/RWD (IPR016135) - T[267-451] 4.41E-40
CDD
UBQ-conjugat_E2 (IPR000608) - T[287-437] 1.09948E-35
ProSiteProfiles
UBQ-conjugat_E2 (IPR000608) - T[288-408] 23.332
Pfam
UBQ-conjugat_E2 (IPR000608) - T[290-435] 4.7E-28

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
UBE2O_HUMAN 53.68 % 254 6.72E-74
BIRC6_HUMAN 50.758 % 145 1.25E-36
UBE2Z_HUMAN 35.088 % 107 2.14E-25