Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'Harore.CG.MTP2014.S2...' > 
  2. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S186.g04981.02.t

Possible name(s)

AL139260.3; GJA10; GJA8

Gene model

Phmamm.CG.MTP2014.S186.g04981

Location

S186 [40,800 / 43,101]

Sequences

Amino acid sequence

Length: 221

>Phmamm.CG.MTP2014.S186.g04981.02.p
AMEDIRRRREESGPPEYAALEDEAFIIDEKTDEKEKEKKEEKKDKDKDEDKVVATKLDSD
TPSRLMLAYVAQVVLRLAVEIGFMVLQFNIYVFKFWVPELFKCARWPCPNVVDCFVSRPK
EKTIMLWIMFGTGLIMIVLNIIELYHLGLRKIIEAWKQRGQDITKEYKTVNNMPHFGGHG
RQYGGARYPRGYPQAVGIRVGYARSSLSGEGGNDFDGDKFI

Nucleotide sequence

Length: 929

>Phmamm.CG.MTP2014.S186.g04981.02.t
GCAATGGAGGACATCAGAAGACGGAGAGAAGAGAGTGGACCACCAGAATATGCTGCTTTG
GAAGACGAGGCGTTTATTATAGACGAAAAGACCGATGAGAAAGAAAAAGAAAAGAAGGAG
GAAAAGAAAGATAAAGACAAAGACGAGGATAAAGTTGTGGCGACCAAATTAGACTCCGAC
ACTCCGTCACGTCTTATGCTTGCCTACGTAGCACAGGTGGTATTGCGACTGGCTGTAGAG
ATTGGATTTATGGTCTTGCAATTCAACATTTACGTGTTTAAATTCTGGGTGCCGGAACTT
TTCAAATGCGCAAGGTGGCCTTGCCCCAACGTGGTCGATTGCTTCGTGTCGAGGCCAAAG
GAAAAGACCATCATGCTCTGGATTATGTTTGGCACGGGACTGATCATGATAGTCCTTAAT
ATTATCGAGCTCTATCACTTGGGTCTACGCAAAATCATCGAAGCCTGGAAACAACGAGGC
CAGGACATCACAAAAGAATACAAGACCGTCAACAACATGCCTCACTTTGGCGGCCACGGA
AGACAATACGGTGGAGCAAGGTATCCAAGAGGTTACCCGCAAGCTGTCGGAATTCGGGTT
GGTTACGCAAGAAGCAGCTTGTCGGGAGAGGGCGGTAATGATTTCGACGGAGACAAGTTC
ATCTGATCTCAATGTTTTTAGCAGCGAGAAAGTGATAGTTTGCAGCGGAGTATGGGACAA
AATTTCGCGGCGTAATTTTGATAATTTTCGCGACTTTCGGCGTCCGCTCAGGCAGGAACA
ACTAATTTACACGTTTTTTGTAAATTTTCTAACGAAAGGCCCTCGTTATTTATTATTTGA
CACACTAGCCCTCTATTAATGTTCCGCAAAACATCCATTTAGCTTACTTTCTGTTATTGA
CTTGAAACCGTAACACAAAACAATCAGCG

InterProScan

Gene3D
Connexin_N_sf (IPR038359) - T[20-160] 1.2E-37
Pfam
Connexin_N (IPR013092) - T[21-148] 1.1E-39
PANTHER
Connexin (IPR000500) - T[30-220] 7.3E-55
PRINTS
Connexin (IPR000500) - T[65-91] 2.6E-24 - T[103-123] 2.6E-24 - T[124-147] 2.6E-24
SMART
Connexin_CCC (IPR019570) - T[79-147] 4.1E-38
ProSitePatterns
Connexin_CS (IPR017990) - T[103-119] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CXA10_HUMAN 39.831 % 96.7 3.79E-23
CXA8_HUMAN 43.617 % 97.8 7.66E-24
CXA9_HUMAN 48.864 % 94.7 1.62E-22