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TRANSCRIPT CARD

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  1. Transcript 'Cisavi.CG.ENS81.R4.4...'
  2. Transcript 'Harore.CG.MTP2014.S2...'
  3. Clone 'cicl014a18'
  4. Transcript 'Phmamm.CG.MTP2014.S1...'
  5. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S186.g04981.01.t

Possible name(s)

AL139260.3; GJA10; GJA8

Location

S186 [40,683 / 42,838]

Sequences

Amino acid sequence

Length: 260

>Phmamm.CG.MTP2014.S186.g04981.01.p
MAKISQAKKLRQEEQDKKKKQKEKQKEKNKKQQEAMRKKAMEDIRRRREESGPPEYAALE
DEAFIIDEKTDEKEKEKKEEKKDKDKDEDKVVATKLDSDTPSRLMLAYVAQVVLRLAVEI
GFMVLQFNIYVFKFWVPELFKCARWPCPNVVDCFVSRPKEKTIMLWIMFGTGLIMIVLNI
IELYHLGLRKIIEAWKQRGQDITKEYKTVNNMPHFGGHGRQYGGARYPRGYPQAVGIRVG
YARSSLSGEGGNDFDGDKFI

Nucleotide sequence

Length: 783

>Phmamm.CG.MTP2014.S186.g04981.01.t
ATGGCCAAGATCAGCCAGGCCAAGAAACTGCGCCAGGAGGAGCAGGACAAAAAGAAGAAA
CAAAAAGAGAAACAAAAAGAGAAAAATAAGAAGCAACAAGAGGCAATGAGGAAGAAGGCA
ATGGAGGACATCAGAAGACGGAGAGAAGAGAGTGGACCACCAGAATATGCTGCTTTGGAA
GACGAGGCGTTTATTATAGACGAAAAGACCGATGAGAAAGAAAAAGAAAAGAAGGAGGAA
AAGAAAGATAAAGACAAAGACGAGGATAAAGTTGTGGCGACCAAATTAGACTCCGACACT
CCGTCACGTCTTATGCTTGCCTACGTAGCACAGGTGGTATTGCGACTGGCTGTAGAGATT
GGATTTATGGTCTTGCAATTCAACATTTACGTGTTTAAATTCTGGGTGCCGGAACTTTTC
AAATGCGCAAGGTGGCCTTGCCCCAACGTGGTCGATTGCTTCGTGTCGAGGCCAAAGGAA
AAGACCATCATGCTCTGGATTATGTTTGGCACGGGACTGATCATGATAGTCCTTAATATT
ATCGAGCTCTATCACTTGGGTCTACGCAAAATCATCGAAGCCTGGAAACAACGAGGCCAG
GACATCACAAAAGAATACAAGACCGTCAACAACATGCCTCACTTTGGCGGCCACGGAAGA
CAATACGGTGGAGCAAGGTATCCAAGAGGTTACCCGCAAGCTGTCGGAATTCGGGTTGGT
TACGCAAGAAGCAGCTTGTCGGGAGAGGGCGGTAATGATTTCGACGGAGACAAGTTCATC
TGA

InterProScan

PANTHER
Connexin (IPR000500) - T[20-259] 1.2E-54
Gene3D
Connexin_N_sf (IPR038359) - T[57-199] 1.8E-37
Pfam
Connexin_N (IPR013092) - T[62-187] 2.4E-39
PRINTS
Connexin (IPR000500) - T[104-130] 3.8E-24 - T[142-162] 3.8E-24 - T[163-186] 3.8E-24
SMART
Connexin_CCC (IPR019570) - T[118-186] 4.1E-38
ProSitePatterns
Connexin_CS (IPR017990) - T[142-158] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CXA10_HUMAN 47.191 % 97.1 6.15E-23
CXA8_HUMAN 43.617 % 100 2.91E-24
CXA9_HUMAN 48.864 % 96.7 7.18E-23