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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S184.g04927.04.t

Possible name(s)

TRAM1; TRAM1L1; TRAM2

Gene model

Phmamm.CG.MTP2014.S184.g04927

Location

S184 [23,528 / 29,263]

Sequences

Amino acid sequence

Length: 265

>Phmamm.CG.MTP2014.S184.g04927.04.p
MGMPRKKPKNPPVMSHEFVIQNHADILACVAIVIVLGLISEATSKLSKPFIFLQYGVTDE
TEEEPENPDAPVPFPKEFGRGILDIFAVFFQALMIAVVHAVIQEYGVDKVSKKLHLSKTK
NSKFSESCQLLVWCVGSAGWGIHLLLQNKFISNIALLWEDYPHSVMSWENKLFMLIQMAY
WFHMYPELYFQKARKEDIPARIQYYTLHLIFITGAYILNFWRIAIVIATLHYIAEGVFHG
CRIAYFAEKNEVSSVGFSVWRILFP

Nucleotide sequence

Length: 879

>Phmamm.CG.MTP2014.S184.g04927.04.t
GTTGGATTTTAATACGTAAATTATGATTGATAATGCTTTAATTCATTTTATTGTATAAAA
CTTTACAAAAAACAAACAAACAATGGGAATGCCAAGAAAGAAGCCGAAGAACCCACCTGT
GATGAGCCATGAATTCGTCATACAAAATCACGCTGATATCCTGGCTTGTGTGGCTATTGT
GATTGTGCTGGGATTAATTTCAGAAGCCACATCGAAGCTCAGCAAACCATTTATATTCCT
ACAATATGGAGTAACTGATGAAACAGAGGAAGAACCAGAAAACCCTGATGCACCAGTGCC
TTTTCCAAAGGAGTTTGGACGTGGAATTCTTGATATTTTTGCTGTGTTTTTCCAAGCTTT
GATGATTGCAGTTGTTCATGCAGTGATTCAGGAATATGGTGTTGATAAAGTGTCAAAGAA
ACTCCATCTTTCTAAAACAAAGAACAGCAAATTCAGTGAATCTTGTCAACTACTTGTGTG
GTGTGTGGGATCGGCTGGTTGGGGAATTCATTTGTTGCTTCAGAATAAGTTTATCAGCAA
CATTGCATTACTATGGGAGGATTACCCACACAGTGTGATGTCATGGGAGAACAAGTTGTT
TATGCTCATCCAGATGGCATATTGGTTTCATATGTATCCTGAACTCTACTTCCAAAAAGC
AAGAAAGGAAGACATCCCAGCTAGAATCCAGTACTACACTCTGCACCTTATATTCATTAC
TGGTGCATATATCCTGAATTTCTGGAGGATAGCGATTGTTATTGCAACTTTGCATTACAT
TGCTGAAGGTGTTTTCCATGGATGTAGAATTGCATACTTTGCTGAGAAAAATGAAGTATC
AAGTGTGGGATTTTCTGTTTGGAGGATTTTGTTTCCGGT

InterProScan

PANTHER
Translocation_assoc_membrane (IPR016447) - T[1-264] 1.5E-111
PIRSF
Lag1/Lac1-like (IPR016439) - T[6-264] 1.3E-15
Pfam
TRAM1 (IPR013599) - T[48-120] 5.1E-14
Pfam
TLC-dom (IPR006634) - T[123-264] 5.1E-16

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TRAM1_HUMAN 45.833 % 230 3.75E-74
TRAM2_HUMAN 40.769 % 200 2.21E-62
TR1L1_HUMAN 40.909 % 202 3.68E-63