- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S184.g04927.02.t
Possible name(s)
TRAM1; TRAM1L1; TRAM2
Gene model
Location
S184 [21,581 / 28,727]
Amino acid sequence
Length: 347
>Phmamm.CG.MTP2014.S184.g04927.02.p
RKKPKNPPVMSHEFVIQNHADILACVAIVIVLGLISEATSKLSKPFIFLQYGVTDETEEE
PENPDAPVPFPKEFGRGILDIFAVFFQALMIAVVHAVIQEYGVDKVSKKLHLSKTKNSKF
SESCQLLVWCVGSAGWGIHLLLQNKFISNIALLWEDYPHSVMSWENKLFMLIQMAYWFHM
YPELYFQKARKEDIPARIQYYTLHLIFITGAYILNFWRIAIVIATLHYIAEGVFHGCRIA
YFAEKNEVSSVGFSVWRILFPVARTFILALSFLMFWFGLGRAENQGIDFATGNFNSFFIR
MICLSAICLLQAWLMWPFIQLQIRRSKEEKLVKKKTAALAMVKPKST
Nucleotide sequence
Length: 1,043
>Phmamm.CG.MTP2014.S184.g04927.02.t
CAAGAAAGAAGCCGAAGAACCCACCTGTGATGAGCCATGAATTCGTCATACAAAATCACG
CTGATATCCTGGCTTGTGTGGCTATTGTGATTGTGCTGGGATTAATTTCAGAAGCCACAT
CGAAGCTCAGCAAACCATTTATATTCCTACAATATGGAGTAACTGATGAAACAGAGGAAG
AACCAGAAAACCCTGATGCACCAGTGCCTTTTCCAAAGGAGTTTGGACGTGGAATTCTTG
ATATTTTTGCTGTGTTTTTCCAAGCTTTGATGATTGCAGTTGTTCATGCAGTGATTCAGG
AATATGGTGTTGATAAAGTGTCAAAGAAACTCCATCTTTCTAAAACAAAGAACAGCAAAT
TCAGTGAATCTTGTCAACTACTTGTGTGGTGTGTGGGATCGGCTGGTTGGGGAATTCATT
TGTTGCTTCAGAATAAGTTTATCAGCAACATTGCATTACTATGGGAGGATTACCCACACA
GTGTGATGTCATGGGAGAACAAGTTGTTTATGCTCATCCAGATGGCATATTGGTTTCATA
TGTATCCTGAACTCTACTTCCAAAAAGCAAGAAAGGAAGACATCCCAGCTAGAATCCAGT
ACTACACTCTGCACCTTATATTCATTACTGGTGCATATATCCTGAATTTCTGGAGGATAG
CGATTGTTATTGCAACTTTGCATTACATTGCTGAAGGTGTTTTCCATGGATGTAGAATTG
CATACTTTGCTGAGAAAAATGAAGTATCAAGTGTGGGATTTTCTGTTTGGAGGATTTTGT
TTCCGGTTGCTCGAACTTTCATTCTTGCTCTTTCCTTCCTCATGTTTTGGTTCGGACTGG
GCAGAGCTGAAAACCAAGGAATTGATTTTGCAACTGGAAACTTTAACTCATTTTTTATCC
GGATGATATGTCTGTCTGCAATCTGTTTGCTGCAAGCTTGGCTGATGTGGCCATTCATTC
AGCTTCAAATCAGAAGAAGCAAGGAAGAAAAACTGGTGAAGAAGAAAACTGCAGCTCTCG
CCATGGTTAAACCAAAATCAACT
| PIRSF |
Translocation_assoc_membrane (IPR016447) - T[1-347] 6.7E-145 |
| PANTHER |
Translocation_assoc_membrane (IPR016447) - T[2-343] 5.2E-140 |
| Pfam |
TRAM1 (IPR013599) - T[44-116] 8.3E-14 |
| SMART |
TLC-dom (IPR006634) - T[118-329] 6.7E-25 |
| ProSiteProfiles |
TLC-dom (IPR006634) - T[118-329] 8.227 |
| Pfam |
TLC-dom (IPR006634) - T[119-319] 6.0E-21 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TRAM1_HUMAN | 46.471 % | 300 | 2.95E-100 |
| TRAM2_HUMAN | 41.935 % | 269 | 4.63E-88 |
| TR1L1_HUMAN | 38.438 % | 234 | 2.06E-74 |
