- Transcript 'Harore.CG.MTP2014.S2...' >
- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S17.g00713.01.t
Possible name(s)
FOXA2; FOXB1; FOXB2
Gene model
Location
S17 [250,732 / 252,211]
Amino acid sequence
Length: 492
>Phmamm.CG.MTP2014.S17.g00713.01.p
MPRPGRDSYGDQKPPYSYIALTAMAIQSSPNKMMSLSEIYRYIMDRFPFYRKNTQRWQNS
LRHNLSFNDCFVKVPRRGDQPGKGSLWAMHPTCGEMFENGSFLRRRKRFKTEDKNQQSSA
HSYPHDAFNQRMFNQSTGEPVHHVINNRGVYDVPGLRAFPQYPGYPLPGQHRHPTVPPTP
MYPQMTPGSPANTAAAVAYFQTAMAGYRNAMASLSMRGNSLHPLMRGYGFPHSEAFRSFL
APRRSADDGVLSAPTRSECDSASEVKSNSFDSSRSGVGSSSPLAQSSSGDESHSNDRVTS
SKAISFSIENIISGRFSPKSASKQKSTEAGPRRKRQSSDGPETPSKKLKLDGDTPAKLDD
KSSSKIQNGDIGVSQTSSTELRLQYAPRTSTPKSDGFYLPFYLQKRDDQTSPSAQADTIS
IPTSGGKNGDSVAHHPTSTAPTTNFSACYLSQGQRMLQLGQSTHSPTSESKDPPLAYSAF
ARLKRFTELQVQ
Nucleotide sequence
Length: 1,479
>Phmamm.CG.MTP2014.S17.g00713.01.t
ATGCCACGACCAGGCAGAGATTCGTACGGAGACCAGAAACCTCCATATTCCTATATCGCC
CTCACAGCAATGGCGATTCAATCGTCTCCCAACAAAATGATGAGCTTGTCGGAAATTTAC
CGTTACATCATGGACCGTTTTCCATTCTACCGGAAAAATACGCAGCGCTGGCAGAACTCT
CTGCGTCACAATCTATCCTTCAACGATTGTTTCGTCAAAGTTCCGCGGCGCGGAGATCAA
CCTGGTAAAGGCAGTCTTTGGGCGATGCACCCCACTTGCGGGGAAATGTTTGAAAACGGA
AGTTTCCTGCGTCGTCGCAAAAGGTTCAAAACTGAAGACAAAAACCAACAGTCATCAGCA
CACAGCTATCCCCACGACGCTTTCAACCAAAGAATGTTCAACCAATCAACGGGCGAACCT
GTACACCACGTGATCAACAACAGAGGGGTGTACGACGTCCCAGGGTTAAGGGCCTTTCCC
CAGTACCCGGGTTACCCTCTACCTGGACAACATCGTCACCCAACTGTTCCTCCGACCCCG
ATGTATCCACAGATGACACCAGGCAGTCCAGCAAACACCGCGGCAGCTGTGGCGTATTTC
CAAACCGCTATGGCGGGTTACCGAAACGCCATGGCGTCTTTGTCAATGCGGGGAAATTCA
CTTCACCCACTGATGAGGGGTTACGGCTTTCCGCACTCCGAAGCTTTCCGAAGCTTTTTG
GCGCCGCGGCGATCGGCCGACGACGGCGTTTTATCGGCGCCCACACGAAGCGAGTGCGAT
TCGGCCAGCGAGGTAAAATCAAACTCTTTCGACTCGAGTCGTTCCGGAGTCGGTAGCAGC
TCGCCACTCGCTCAGAGTTCGTCAGGCGATGAGTCGCACTCGAATGACCGAGTTACGAGT
TCCAAAGCCATCAGCTTCTCGATTGAGAATATCATTAGTGGAAGATTTTCCCCAAAGAGC
GCAAGCAAACAAAAGTCAACCGAAGCAGGACCAAGGCGCAAGCGACAATCTAGCGATGGA
CCCGAAACTCCAAGCAAGAAACTCAAGCTCGACGGCGATACCCCGGCAAAATTGGACGAC
AAATCAAGCTCAAAAATACAAAATGGCGACATCGGCGTTTCGCAGACGTCTTCTACCGAA
CTTCGCTTGCAGTACGCCCCGCGAACAAGCACCCCAAAGTCCGACGGTTTTTACTTGCCC
TTCTACCTGCAAAAACGCGACGACCAAACTTCACCAAGCGCACAGGCTGATACGATTTCT
ATTCCGACATCGGGAGGAAAAAATGGCGACAGTGTAGCGCATCACCCAACCAGCACAGCG
CCAACAACAAACTTTAGCGCTTGTTATTTGTCGCAGGGACAGAGAATGTTGCAATTGGGC
CAATCCACTCACAGTCCTACGTCTGAATCTAAAGACCCACCACTTGCTTATTCGGCGTTT
GCCCGCCTAAAGCGTTTCACCGAGTTGCAAGTCCAATAG
| SMART |
Fork_head_dom (IPR001766) - T[11-101] 5.7E-59 |
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[11-112] 3.6E-44 |
| Pfam |
Fork_head_dom (IPR001766) - T[12-98] 5.7E-36 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[12-107] 9.98E-39 |
| ProSiteProfiles |
Fork_head_dom (IPR001766) - T[13-107] 38.856 |
| ProSitePatterns |
TF_fork_head_CS_1 (IPR018122) - T[13-26] . |
| CDD |
Fork_head_dom (IPR001766) - T[13-90] 6.48421E-49 |
| PRINTS |
Fork_head_dom (IPR001766) - T[13-26] 2.3E-22 - T[34-51] 2.3E-22 - T[57-74] 2.3E-22 |
| ProSitePatterns |
TF_fork_head_CS_2 (IPR030456) - T[57-63] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FOXA2_HUMAN | 68.142 % | 180 | 3.98E-51 |
| FOXB1_HUMAN | 76.378 % | 220 | 7.0E-68 |
| FOXB2_HUMAN | 78.378 % | 206 | 2.78E-61 |