- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S17.g00697.01.t
Possible name(s)
ZNF235; ZNF714; ZNF83
Gene model
Location
S17 [38,361 / 40,267]
Amino acid sequence
Length: 351
>Phmamm.CG.MTP2014.S17.g00697.01.p
MMNQDMLESFSCKFCEQTFVKRKSLEDHIRTHKEASYSKNDDNNCTEKASLSNQDQMFVL
VDSEQNQVEVQGHRFKCDICEKSFTREWNRKRHMVQHFDDKSFQCEICETRFKTKFSMTS
HMLVHSKEKPFKCETCEKHFKTLFLLKSHLLIHAHIKSYKCKVCEKRFVNEKRLIRHSLI
HTDEKPFSCDYCEKTFCFKSELKIHIMSHTGEKPHRCDVCEKRFYNLTGLNRHKMIHTGE
KPFRCNYCKKKLCSKSELQTHIMSHTGEKPHRCDVCEKRFYNLTGLNRHKLIHTGEKLFA
CDICDKRFQRKENLNIHMVIHSNKMPYKCDICEKQFKRKQEVKRHMKSNHI
Nucleotide sequence
Length: 1,906
>Phmamm.CG.MTP2014.S17.g00697.01.t
ATTTTGGCACACCGAGAACTACATAATACACGCTCATCCAAGTAGAATACATCACAATAT
CACCCCATAACACAAATTTCACAGATTAATATAGCACAAAATTGACGTAATGATCGCAAC
CAAACGCATTGTTACGTCATAGGAATTGTTTCTAATTAAATATTGCGACAGAGTTTACAT
GAAATAACATCGTCATGAAGCTAAAGAAACTATTGTCATTTTACAAACGAACAAATAAAT
GGCAAAATGCATGCAAACCATTTAATTGTTGTATGTTCTGTATACACGATAACAAAAATG
CTTGCTAACATATCGTTCGAAATTCAACAATCAACGAAATCACCATAATTTCAGAATCAG
TGAGTTTTTAACATCACTGTATTTCATTGTGAATTTCAATCTTAACAACACCACGCAAAG
TCATACTTAAAAATCAATTTGAAACACAATCAGAGTTATAATCCCGTATCAAAACACAAC
AAAACTTTGCTGCAGACGACAAACTGTAAATGGTAGCTTTTATTGGTAACACATTCATAC
GTCTTTGCAAAATCTCACAATTAGGACTTTCTAAATGTGGTTGCTTTTCATGTGTCGTTT
CACTTCCTGTTTCCTTTTGAATTGTTTTTCGCAAATATCACACTTGTACGGCATCTTGTT
GCTGTGAATTACCATGTGTATGTTGAGATTTTCTTTCCTCTGAAATCGTTTGTCACAAAT
ATCACATGCAAACAGTTTTTCTCCTGTGTGAATCAGTTTATGTCGATTTAACCCGGTAAG
ATTATAAAATCGCTTTTCACAAACATCACATCGATGAGGTTTTTCTCCAGTGTGGCTCAT
AATGTGAGTTTGTAATTCACTTTTGGAACAAAGTTTCTTTTTACAGTAATTACACCTAAA
CGGCTTTTCTCCTGTGTGAATCATTTTGTGTCGATTTAACCCGGTAAGATTATAAAATCG
CTTTTCACAAACATCACATCGATGAGGTTTTTCTCCAGTGTGGCTCATAATGTGGATTTT
TAATTCACTTTTGAAACAAAATGTCTTTTCACAGTAATCACAGCTAAACGGCTTTTCATC
AGTATGAATTAAGCTATGCCTGATTAAACGTTTTTCGTTGACGAAACGTTTTTCACACAC
CTTACACTTGTAAGATTTAATGTGTGCATGAATTAACAAGTGGCTTTTTAACAAGAAAAG
AGTTTTGAAGTGTTTTTCGCAAGTTTCGCATTTAAATGGTTTTTCTTTTGAATGAACTAA
CATGTGTGATGTCATGGAAAATTTTGTTTTAAACCTAGTTTCACATATTTCACACTGAAA
AGATTTGTCATCAAAATGTTGCACCATGTGTCTTTTGCGATTCCATTCTCGAGTAAATGA
CTTTTCACAAATATCACATTTGAAACGGTGCCCTTGAACTTCAACTTGATTTTGTTCGGA
GTCGACCAGCACAAACATTTGATCTTGATTACTTAGTGATGCCTTCTCTGTACAATTATT
ATCATCATTCTTGGAATAACTCGCTTCCTTATGTGTCCTGATGTGATCTTCAAGAGATTT
TCTTTTCACAAATGTTTGTTCACAAAACTTGCACGAAAAACTTTCTAACATGTCTTGGTT
CATCATACGTTTATTGATCTTACACAGCAAGGATTTTTGTTGCAGATACCCTGTAAAATA
AGATAAATGAGTTTGTTGCTTTAGAGTGTATCGGACTTTGGACTTATATTCAAACTGTTT
TATCACATGCAATAATCGTGCCGCACATACGTCTTTACAACTATGGAAAAGCAACGTCTT
GAACAGCCTAGCATATACGTGTTAACTCATTTCAGATGTTAATGTCGCTACTAAAACAAA
ATATATCTGATCCGATCTAACTATGTTTGTGAACGCAAAATAAAAC
| Pfam |
Znf_C2H2_type (IPR013087) - T[10-32] 0.0015 - T[75-97] 5.5E-4 - T[103-125] 6.3E-4 - T[131-153] 0.0015 - T[187-209] 3.2E-4 - T[243-265] 0.0018 - T[299-321] 1.0E-4 - T[327-350] 9.6E-5 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[10-32] 10.783 - T[75-102] 11.115 - T[103-130] 12.715 - T[131-158] 10.263 - T[159-186] 14.378 - T[187-214] 14.877 - T[215-242] 14.544 - T[243-270] 13.942 - T[271-298] 12.799 - T[299-326] 13.318 - T[327-351] 11.718 |
| SMART |
Znf_C2H2_type (IPR013087) - T[10-32] 0.0027 - T[75-97] 0.0014 - T[103-125] 9.6E-4 - T[131-153] 0.048 - T[159-181] 0.0017 - T[187-209] 0.033 - T[215-237] 0.0051 - T[243-265] 0.011 - T[271-293] 0.0065 - T[299-321] 3.9E-4 - T[327-350] 1.7E-4 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[12-32] . - T[77-97] . - T[105-125] . - T[133-155] . - T[161-181] . - T[189-209] . - T[217-237] . - T[245-265] . - T[273-293] . - T[301-321] . - T[329-350] . |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[74-125] 1.59E-12 - T[112-168] 1.02E-14 - T[168-224] 6.72E-19 - T[224-280] 3.17E-18 - T[280-336] 2.57E-19 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZN235_HUMAN | 37.278 % | 239 | 9.77E-73 |
| ZNF83_HUMAN | 38.871 % | 228 | 1.32E-70 |
| ZN714_HUMAN | 39.233 % | 228 | 3.35E-70 |
