- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S17.g00696.01.t
Possible name(s)
ZNF226; ZNF235; ZNF431
Gene model
Location
S17 [30,812 / 32,803]
Amino acid sequence
Length: 406
>Phmamm.CG.MTP2014.S17.g00696.01.p
MHRISQAESFLLCNISKYMMYQDTLESFFKVPRPVGTCKFREQTFGQSNFLNDYIKKQTK
SECYEKYEQRVENNYTESATRKEKLHVPVKCVQTPADNEKKRFKCNICEKSFAQESSRKS
HMVIHSGERPFQCEVCNNKFRRKSDMKVHMLVHSHEKPYKCDVCDKRFSQRGSRNKHLLV
HSDDTLFKCDICDKGFKEKGNLQKHLLIQSGIKRFTCKVCDKRFGEKKDLQRHELIHTDE
KPYQCSYCDKRFNSTASRGKHLRIHTGEKKFKCKICEKSFTQSGTLTKHMMTHTGEKSFK
CDYCEKPFRSKGDLKTHMRTHTGEKLYRCDICEKRFSSLGSLKRHKLIHMGEKPYACDFC
DKRFNSSSNLCTHYVVHRDEMPFKCDVCEKTFKRKNEVKKHKHRNH
Nucleotide sequence
Length: 1,815
>Phmamm.CG.MTP2014.S17.g00696.01.t
CGTTAGTTTTATCAAAAGCTTATTAAATGATAAAGTAAGAGAATACAATATTTAAATTTA
AACAATTGATAATTCTAAAGCAAACACTTTGTACAAGATTTATTAACAGTTTGAAAATGT
GTGCAATAAAGCAGTTTGAATTCAACATTCTCAACATAACTGCATCAAGACACCAGAAAA
AAGGTTACATGGAGGACGAAGTAAGAATTTGAAAACAACAACAAACAAGGCGTTTACGCA
ATCTAACGTCTAGACTAGATTTATACGGAGTGCAAGTTTTATTGGCCAAATAATAATAAT
CATCACCAAGAAAAGCTACGGGATAATCTTTTGGTTTCGGAGTTACGTTCATCGAAATGC
TTAATGGGGCGCTCAGTCCTAAAGTCAGCATACATAAACATTAATGCAAAAATAAACTTA
TGCAAATGTTAAAATCCTATTTTATTCTGCATATAATGCTTCTTCATTTTGTTCAGTGTT
GAATCTTTATGTTTTCCAAACATCTTAGCCAATGTCTGCATATTATTCCTAGTGATTCCG
ATGCTTATGTTTTTTTACTTCATTTTTCCGCTTAAAAGTTTTTTCACAAACATCACACTT
GAATGGCATCTCGTCCCTGTGAACAACGTAATGCGTGCAAAGATTTGAGCTGGAATTGAA
TCGTTTGTCGCAAAAATCACATGCGTATGGTTTTTCTCCCATGTGAATCAGTTTATGTCG
CTTCAAAGATCCAAGTGAACTAAATCGTTTTTCACAAATGTCACATCGATATAGTTTCTC
TCCAGTGTGGGTTCTCATGTGTGTTTTCAAATCACCTTTGGAACGAAATGGTTTTTCACA
GTAATCACATTTAAATGATTTTTCACCTGTGTGAGTCATCATGTGCTTTGTGAGCGTTCC
TGATTGAGTAAAGGATTTCTCACAAATCTTGCATTTGAATTTTTTTTCTCCAGTGTGAAT
CCTCAAATGTTTTCCTCTGCTTGCGGTTGAATTAAATCTTTTGTCACAATAACTACACTG
GTAAGGTTTCTCATCCGTGTGAATCAACTCGTGTCTTTGCAAATCTTTCTTTTCCCCGAA
ACGTTTGTCACATACTTTGCAAGTGAAGCGTTTAATGCCAGATTGAATCAATAAGTGTTT
TTGTAGATTGCCTTTTTCTTTGAACCCCTTATCGCAAATGTCACATTTGAACAGTGTGTC
GTCACTGTGTACCAACAAATGTTTGTTGCGACTTCCTCGTTGACTAAATCTTTTATCGCA
GACATCGCATTTGTATGGTTTTTCATGTGAGTGGACCAACATATGTACTTTCATGTCACT
TTTTCTCCTGAATTTGTTGTTGCATACTTCGCACTGAAAAGGTCTTTCTCCTGAATGGAT
CACCATGTGCGATTTGCGACTACTTTCTTGAGCAAATGATTTTTCACAAATATTACATTT
GAAACGTTTCTTTTCATTATCAGCTGGAGTTTGCACACACTTGACAGGTACATGCAGTTT
TTCTTTCCTCGTCGCACTCTCTGTATAGTTATTCTCTACTCTCTGTTCATATTTCTCGTA
ACATTCAGATTTCGTTTGTTTCTTAATGTAATCGTTAAGAAAGTTACTTTGTCCAAATGT
TTGCTCCCTAAACTTGCACGTTCCAACGGGTCTTGGTACTTTAAAAAAACTTTCCAGCGT
GTCTTGGTACATCATGTATTTGCTAATGTTACACAACAAGAAACTTTCTGCTTGGGATAT
CCTGTGCATCCAGAAACAATTTGTTTTGATTCTTCCGTATTTTACATGTGCACTGTAAAA
ACGCAATATTACTTA
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[101-153] 1.85E-16 - T[140-196] 3.93E-18 - T[196-252] 1.65E-17 - T[239-299] 5.88E-19 - T[308-364] 5.79E-22 - T[349-401] 9.31E-16 |
| SMART |
Znf_C2H2_type (IPR013087) - T[103-125] 0.0028 - T[131-153] 6.3E-4 - T[159-181] 5.9E-4 - T[187-207] 6.2 - T[215-237] 8.9E-4 - T[243-265] 0.0047 - T[271-293] 1.4E-4 - T[299-321] 2.7E-5 - T[327-349] 1.4E-4 - T[355-377] 0.0031 - T[383-406] 0.031 |
| Pfam |
Znf_C2H2_type (IPR013087) - T[103-125] 9.3E-4 - T[131-153] 2.1E-4 - T[159-181] 0.0015 - T[187-207] 2.4E-4 - T[215-237] 0.002 - T[243-265] 0.0056 - T[271-293] 2.2E-6 - T[299-321] 7.7E-7 - T[327-349] 2.8E-4 - T[355-377] 0.0027 - T[383-406] 0.0093 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[103-130] 14.918 - T[131-158] 13.858 - T[159-186] 11.302 - T[187-214] 11.281 - T[215-242] 14.669 - T[243-270] 14.149 - T[271-298] 15.209 - T[299-326] 15.002 - T[327-354] 14.939 - T[355-382] 13.131 - T[383-406] 11.427 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[105-125] . - T[133-155] . - T[161-181] . - T[217-237] . - T[245-265] . - T[273-293] . - T[301-321] . - T[329-349] . - T[357-377] . - T[385-406] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZN226_HUMAN | 44.625 % | 275 | 7.73E-85 |
| ZN431_HUMAN | 43.189 % | 268 | 1.21E-84 |
| ZN235_HUMAN | 41.479 % | 274 | 2.71E-85 |
