Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'Harore.CG.MTP2014.S1...' > 
  2. Clone 'cima878813' > 
  3. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S1771.g15611.01.t

Possible name(s)

Phmamm.CG.MTP2014.S1771.g15611

Gene model

Phmamm.CG.MTP2014.S1771.g15611

Location

S1771 [5,991 / 8,088]

Sequences

Amino acid sequence

Length: 466

>Phmamm.CG.MTP2014.S1771.g15611.01.p
MSDDIRGVKLNVIRRQRVEQVRKIQDYVTITYKDSMKLIAKHTVNIMGKPPCKFALVGMG
SLAKNEITPYSDFESIIVLDEDQHDDKNILNYFRWFATVYQMILVRLGETLLTFLAIPCL
NNPLQKEENWFYDAYTPCGIRPDGFAPQASKNPLGRQTKTEKKPWTTELIKPVSEMVKYL
DSEEDSRNGYHLADMLTTTCFVFGDSEVFERIKSKIDHKLNQIPLFNPRVKQKLQQDFEL
YKSATIEHVLYLHEAQQCLIMLKKYKQAIETTKLLYMVESAFSESTLSTIESTAKFHTDM
AICYQNLGDYKNARYCFEFAYNKTKNQLSRTVAGNRWEQLQCGYIACLNYRGDFVDALLV
NEDLMSERRKLHIHEENDVILSIAFLCRGLSLCGLNRYKEAFDCFDKYLKSKVIPESQGA
NQILDFVTRWIELGRLSNSEIVLQYKDRIEKKIKQIATSYKHSNLS

Nucleotide sequence

Length: 1,401

>Phmamm.CG.MTP2014.S1771.g15611.01.t
ATGTCTGACGATATTAGAGGCGTTAAGCTTAATGTAATACGAAGACAGAGAGTTGAACAA
GTACGAAAAATTCAGGATTATGTTACCATAACATACAAAGACTCCATGAAACTTATCGCA
AAACACACTGTTAACATAATGGGCAAACCACCTTGTAAGTTTGCTTTGGTAGGAATGGGT
TCGTTGGCCAAAAACGAAATTACTCCATATTCTGATTTCGAAAGTATTATTGTACTGGAT
GAAGATCAACATGACGACAAAAACATTTTGAATTATTTTCGATGGTTTGCAACGGTTTAT
CAAATGATACTTGTTCGTCTGGGTGAAACTTTACTCACATTTCTTGCAATTCCATGTCTT
AACAATCCTTTACAGAAAGAAGAAAATTGGTTTTATGACGCATACACACCATGTGGAATT
CGTCCTGATGGATTCGCTCCTCAAGCTAGTAAAAATCCATTAGGAAGGCAAACAAAGACA
GAAAAGAAGCCGTGGACAACTGAGCTAATTAAACCAGTCAGTGAGATGGTTAAGTACCTG
GACTCTGAGGAAGATTCGAGGAACGGTTATCATTTAGCAGATATGTTGACCACAACGTGT
TTTGTTTTTGGCGATTCTGAAGTTTTTGAGCGAATTAAATCAAAAATCGATCATAAACTA
AATCAGATACCCCTTTTCAACCCACGAGTAAAGCAGAAACTCCAACAAGATTTTGAACTG
TACAAAAGTGCAACTATCGAGCATGTTTTGTACTTGCATGAAGCCCAGCAATGTTTAATT
ATGTTAAAAAAATACAAACAAGCAATAGAAACAACCAAACTTTTGTACATGGTTGAATCT
GCATTTAGTGAAAGTACTTTAAGTACTATTGAAAGTACTGCAAAGTTCCACACAGACATG
GCAATATGCTACCAAAACCTTGGAGACTATAAAAATGCGCGATATTGTTTTGAGTTTGCA
TACAACAAAACGAAAAATCAACTTTCCAGAACGGTGGCCGGTAATCGTTGGGAGCAACTG
CAGTGTGGATACATCGCATGCCTTAACTACAGAGGTGATTTTGTTGATGCCCTTCTGGTG
AATGAAGATTTAATGTCTGAAAGACGAAAGTTGCACATACATGAAGAAAATGACGTTATT
TTAAGCATTGCATTTTTGTGCAGAGGTCTCAGTCTGTGTGGCTTAAACAGATACAAAGAA
GCTTTTGATTGCTTTGACAAATATTTAAAAAGCAAAGTTATCCCTGAAAGTCAAGGAGCA
AACCAAATTCTAGACTTTGTTACTCGGTGGATCGAATTGGGCCGGTTATCAAACTCTGAA
ATTGTCTTACAATATAAAGACAGAATTGAAAAGAAGATAAAACAGATCGCTACCTCATAC
AAGCATTCGAATTTGAGTTAA

InterProScan

Pfam
GlnD_Uridyltrans_N (IPR005105) - T[19-108] 3.4E-7
Gene3D
TPR-like_helical_dom_sf (IPR011990) - T[231-425] 8.3E-9
SUPERFAMILY
TPR-like_helical_dom_sf (IPR011990) - T[293-411] 3.22E-9

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value