- Transcript 'KH2012:KH.C1.1001.v1...' >
- Region 'REG00001446' >
- Transcript 'Phmamm.CG.MTP2014.S4...' >
- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S1751.g15575.01.t
Possible name(s)
MTF1; ZNF143; ZNF76
Gene model
Location
S1751 [970 / 11,734]
Amino acid sequence
Length: 617
>Phmamm.CG.MTP2014.S1751.g15575.01.p
NNDVEMCKFTCDQTSVSVETSSSINELGSQLFDNQQHKTLFYSSDSDDHMSRMQDEFQNG
SMKMDRKGMIRHTIMPEDDKVLMSFSPSEEMRMPQECNIDGATLTLETTDGDQKKEVKRF
QCLYTGCKRAYSTAGNLKSHQKTHRGEYYFTCDQAGCGKAFLTSYSLKVHVRVHTKERPY
QCQLQHCEKSFNTLYRLKAHQRLHNGQTFNCDSEGCTKFFTTLSDLRKHYRIHTGERPFK
CNVPQCSKAFTVSHHLKSHIRSHTGERPYTCEKEGCTKAYATQHSLKQHKSKDHREEEQR
METSGQTPCYDLDKAAEMLLGAADSLRLSQPDPYSHARVSPVQDVHSPSGSDISMGVASP
PNLQQPSPKILTLHKIDSSGSDGTNVTSQASCELKEAEISSLAKVAMQAISENQFSGVPI
VIIKKETREVCQCPCKQTDPSCHSEEDGPARLVVLDSNALPPHVVDPRNSVPQNNPYNPS
PMPRTSPVPMPPQQVHAPQPAHHQQPNRHSPASFGYNMQPTQNDVNAGFDLQNLGLSQQV
NCPGGYDYGLATSQGNFNLEQLDNSLQPNMNDMMQSNFATTSESFSTLFTSIDAPISNGS
SSAGCHSSHADRQSHHY
Nucleotide sequence
Length: 2,081
>Phmamm.CG.MTP2014.S1751.g15575.01.t
CAACAATGATGTTGAGATGTGCAAATTTACCTGCGATCAAACAAGTGTTTCTGTGGAAAC
AAGCAGTTCGATTAATGAACTTGGATCACAGTTGTTCGACAACCAACAGCATAAAACCTT
GTTTTATTCAAGTGACTCAGATGATCACATGTCAAGAATGCAAGATGAGTTTCAGAATGG
TTCAATGAAAATGGACAGGAAAGGAATGATACGACATACTATTATGCCAGAAGATGACAA
AGTGTTGATGTCCTTTTCCCCATCAGAGGAAATGCGTATGCCGCAAGAATGCAACATTGA
TGGTGCAACTTTGACACTGGAAACAACAGATGGGGATCAAAAGAAAGAAGTGAAACGATT
CCAATGCTTGTACACTGGCTGCAAACGAGCTTACAGCACAGCAGGAAACCTCAAATCACA
TCAAAAAACCCACCGAGGCGAATATTACTTTACTTGTGATCAGGCTGGTTGCGGCAAGGC
TTTCCTTACCAGCTACAGCTTAAAGGTCCATGTGCGTGTACACACCAAAGAACGACCTTA
CCAGTGCCAGTTACAACACTGCGAAAAATCGTTCAACACACTGTACAGGCTTAAGGCTCA
CCAACGGTTGCATAATGGACAGACTTTTAACTGCGACTCCGAAGGCTGTACGAAGTTTTT
TACGACCCTCAGTGACCTTCGCAAACATTATCGCATTCACACAGGCGAAAGACCATTTAA
ATGTAATGTACCACAATGCAGCAAGGCGTTTACAGTGAGCCACCACCTTAAATCACACAT
CAGGAGTCACACAGGTGAGCGACCATATACTTGCGAGAAAGAGGGTTGCACGAAAGCTTA
CGCGACACAACACAGTTTGAAACAACACAAGTCAAAAGATCACAGGGAAGAAGAACAAAG
GATGGAAACGTCTGGACAGACTCCGTGCTATGACCTGGACAAAGCTGCGGAAATGTTACT
TGGAGCTGCTGATTCGTTACGCTTGAGTCAACCCGACCCATACAGTCATGCCAGGGTTTC
ACCAGTGCAGGACGTTCACTCTCCTTCTGGTAGTGACATAAGTATGGGAGTTGCCAGTCC
ACCTAACTTACAACAACCATCACCGAAAATTCTCACCCTGCATAAAATTGACTCTTCGGG
ATCAGATGGAACAAATGTGACGTCACAAGCATCATGCGAGTTAAAGGAAGCTGAAATATC
TTCTCTTGCTAAAGTTGCCATGCAGGCTATATCAGAAAACCAATTCAGTGGTGTTCCTAT
CGTCATCATTAAGAAAGAAACCCGCGAAGTTTGCCAGTGTCCGTGCAAACAAACCGACCC
AAGTTGTCACTCGGAAGAGGACGGCCCAGCTCGGCTTGTGGTGCTCGACAGCAACGCACT
TCCACCACATGTAGTAGATCCGCGTAACTCTGTACCACAAAACAACCCATACAACCCCAG
TCCAATGCCCCGAACCTCTCCTGTACCGATGCCACCACAACAAGTCCACGCTCCGCAGCC
TGCACATCATCAGCAGCCAAATCGACATTCACCCGCTTCCTTCGGATACAACATGCAGCC
CACACAGAACGACGTGAACGCGGGTTTCGATCTACAGAACCTTGGTCTTTCGCAGCAGGT
CAACTGTCCGGGCGGATACGATTACGGTCTAGCGACAAGCCAAGGCAATTTCAACTTAGA
ACAGCTTGATAACAGTCTCCAGCCAAACATGAATGACATGATGCAGAGTAATTTCGCTAC
CACGAGTGAATCGTTCTCGACTTTATTCACATCGATTGATGCACCGATTAGCAACGGTAG
CAGCTCGGCAGGTTGCCATAGCAGCCATGCTGATCGACAATCACACCATTATTGATGAAA
TTTTTTTCCTAAAACTCATCCGCAATGTCCGGATAATTGCACAAACTTTGTTCGTTACAC
TATGTATTTGCATATAAAGGCAAACGCTTGCTGTACACATGTCTATATTTCACGCGGCTC
AGCGCTTTGCTGCAACACTTTTTAACGCTTATCATTGCCAGTATTCCTTTCTTTTCACTC
CTCATAGCTTTTCAATCTCGAACATCAAAAGAAGTGACTCC
| PANTHER |
Metal_TF1 (IPR029796) - T[10-325] 3.2E-143 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[117-161] 4.71E-8 - T[160-213] 6.44E-13 - T[220-273] 1.38E-19 - T[267-295] 2.01E-5 |
| Pfam |
Znf_C2H2_type (IPR013087) - T[120-144] 0.002 - T[150-174] 0.0032 - T[180-204] 0.0015 - T[209-233] 4.2E-4 - T[239-263] 9.4E-4 - T[269-294] 0.011 |
| SMART |
Znf_C2H2_type (IPR013087) - T[120-144] 0.0033 - T[150-174] 7.4E-4 - T[180-204] 0.025 - T[209-233] 0.0075 - T[239-263] 0.0087 - T[269-294] 0.041 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[120-149] 11.468 - T[150-179] 15.126 - T[180-209] 12.445 - T[209-238] 15.438 - T[239-268] 16.228 - T[269-299] 10.305 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[122-144] . - T[152-174] . - T[182-204] . - T[211-233] . - T[241-263] . - T[271-294] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MTF1_HUMAN | 62.5 % | 312 | 9.39E-97 |
| ZN143_HUMAN | 48.045 % | 178 | 2.96E-48 |
| ZNF76_HUMAN | 47.701 % | 172 | 2.22E-46 |