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TRANSCRIPT CARD

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  1. Transcript 'Moocci.CG.ELv1_2.S56...'
  2. Transcript 'Haaura.CG.MTP2014.S1...'
  3. Clone 'AHC0AAA172YE07'
  4. Transcript 'KH2012:KH.C1.1001.v1...'
  5. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S1751.g15575.01.t

Possible name(s)

MTF1; ZNF143; ZNF76

Location

S1751 [970 / 11,734]

Sequences

Amino acid sequence

Length: 617

>Phmamm.CG.MTP2014.S1751.g15575.01.p
NNDVEMCKFTCDQTSVSVETSSSINELGSQLFDNQQHKTLFYSSDSDDHMSRMQDEFQNG
SMKMDRKGMIRHTIMPEDDKVLMSFSPSEEMRMPQECNIDGATLTLETTDGDQKKEVKRF
QCLYTGCKRAYSTAGNLKSHQKTHRGEYYFTCDQAGCGKAFLTSYSLKVHVRVHTKERPY
QCQLQHCEKSFNTLYRLKAHQRLHNGQTFNCDSEGCTKFFTTLSDLRKHYRIHTGERPFK
CNVPQCSKAFTVSHHLKSHIRSHTGERPYTCEKEGCTKAYATQHSLKQHKSKDHREEEQR
METSGQTPCYDLDKAAEMLLGAADSLRLSQPDPYSHARVSPVQDVHSPSGSDISMGVASP
PNLQQPSPKILTLHKIDSSGSDGTNVTSQASCELKEAEISSLAKVAMQAISENQFSGVPI
VIIKKETREVCQCPCKQTDPSCHSEEDGPARLVVLDSNALPPHVVDPRNSVPQNNPYNPS
PMPRTSPVPMPPQQVHAPQPAHHQQPNRHSPASFGYNMQPTQNDVNAGFDLQNLGLSQQV
NCPGGYDYGLATSQGNFNLEQLDNSLQPNMNDMMQSNFATTSESFSTLFTSIDAPISNGS
SSAGCHSSHADRQSHHY

Nucleotide sequence

Length: 2,081

>Phmamm.CG.MTP2014.S1751.g15575.01.t
CAACAATGATGTTGAGATGTGCAAATTTACCTGCGATCAAACAAGTGTTTCTGTGGAAAC
AAGCAGTTCGATTAATGAACTTGGATCACAGTTGTTCGACAACCAACAGCATAAAACCTT
GTTTTATTCAAGTGACTCAGATGATCACATGTCAAGAATGCAAGATGAGTTTCAGAATGG
TTCAATGAAAATGGACAGGAAAGGAATGATACGACATACTATTATGCCAGAAGATGACAA
AGTGTTGATGTCCTTTTCCCCATCAGAGGAAATGCGTATGCCGCAAGAATGCAACATTGA
TGGTGCAACTTTGACACTGGAAACAACAGATGGGGATCAAAAGAAAGAAGTGAAACGATT
CCAATGCTTGTACACTGGCTGCAAACGAGCTTACAGCACAGCAGGAAACCTCAAATCACA
TCAAAAAACCCACCGAGGCGAATATTACTTTACTTGTGATCAGGCTGGTTGCGGCAAGGC
TTTCCTTACCAGCTACAGCTTAAAGGTCCATGTGCGTGTACACACCAAAGAACGACCTTA
CCAGTGCCAGTTACAACACTGCGAAAAATCGTTCAACACACTGTACAGGCTTAAGGCTCA
CCAACGGTTGCATAATGGACAGACTTTTAACTGCGACTCCGAAGGCTGTACGAAGTTTTT
TACGACCCTCAGTGACCTTCGCAAACATTATCGCATTCACACAGGCGAAAGACCATTTAA
ATGTAATGTACCACAATGCAGCAAGGCGTTTACAGTGAGCCACCACCTTAAATCACACAT
CAGGAGTCACACAGGTGAGCGACCATATACTTGCGAGAAAGAGGGTTGCACGAAAGCTTA
CGCGACACAACACAGTTTGAAACAACACAAGTCAAAAGATCACAGGGAAGAAGAACAAAG
GATGGAAACGTCTGGACAGACTCCGTGCTATGACCTGGACAAAGCTGCGGAAATGTTACT
TGGAGCTGCTGATTCGTTACGCTTGAGTCAACCCGACCCATACAGTCATGCCAGGGTTTC
ACCAGTGCAGGACGTTCACTCTCCTTCTGGTAGTGACATAAGTATGGGAGTTGCCAGTCC
ACCTAACTTACAACAACCATCACCGAAAATTCTCACCCTGCATAAAATTGACTCTTCGGG
ATCAGATGGAACAAATGTGACGTCACAAGCATCATGCGAGTTAAAGGAAGCTGAAATATC
TTCTCTTGCTAAAGTTGCCATGCAGGCTATATCAGAAAACCAATTCAGTGGTGTTCCTAT
CGTCATCATTAAGAAAGAAACCCGCGAAGTTTGCCAGTGTCCGTGCAAACAAACCGACCC
AAGTTGTCACTCGGAAGAGGACGGCCCAGCTCGGCTTGTGGTGCTCGACAGCAACGCACT
TCCACCACATGTAGTAGATCCGCGTAACTCTGTACCACAAAACAACCCATACAACCCCAG
TCCAATGCCCCGAACCTCTCCTGTACCGATGCCACCACAACAAGTCCACGCTCCGCAGCC
TGCACATCATCAGCAGCCAAATCGACATTCACCCGCTTCCTTCGGATACAACATGCAGCC
CACACAGAACGACGTGAACGCGGGTTTCGATCTACAGAACCTTGGTCTTTCGCAGCAGGT
CAACTGTCCGGGCGGATACGATTACGGTCTAGCGACAAGCCAAGGCAATTTCAACTTAGA
ACAGCTTGATAACAGTCTCCAGCCAAACATGAATGACATGATGCAGAGTAATTTCGCTAC
CACGAGTGAATCGTTCTCGACTTTATTCACATCGATTGATGCACCGATTAGCAACGGTAG
CAGCTCGGCAGGTTGCCATAGCAGCCATGCTGATCGACAATCACACCATTATTGATGAAA
TTTTTTTCCTAAAACTCATCCGCAATGTCCGGATAATTGCACAAACTTTGTTCGTTACAC
TATGTATTTGCATATAAAGGCAAACGCTTGCTGTACACATGTCTATATTTCACGCGGCTC
AGCGCTTTGCTGCAACACTTTTTAACGCTTATCATTGCCAGTATTCCTTTCTTTTCACTC
CTCATAGCTTTTCAATCTCGAACATCAAAAGAAGTGACTCC

InterProScan

PANTHER
Metal_TF1 (IPR029796) - T[10-325] 3.2E-143
SUPERFAMILY
Znf_C2H2_sf (IPR036236) - T[117-161] 4.71E-8 - T[160-213] 6.44E-13 - T[220-273] 1.38E-19 - T[267-295] 2.01E-5
Pfam
Znf_C2H2_type (IPR013087) - T[120-144] 0.002 - T[150-174] 0.0032 - T[180-204] 0.0015 - T[209-233] 4.2E-4 - T[239-263] 9.4E-4 - T[269-294] 0.011
SMART
Znf_C2H2_type (IPR013087) - T[120-144] 0.0033 - T[150-174] 7.4E-4 - T[180-204] 0.025 - T[209-233] 0.0075 - T[239-263] 0.0087 - T[269-294] 0.041
ProSiteProfiles
Znf_C2H2_type (IPR013087) - T[120-149] 11.468 - T[150-179] 15.126 - T[180-209] 12.445 - T[209-238] 15.438 - T[239-268] 16.228 - T[269-299] 10.305
ProSitePatterns
Znf_C2H2_type (IPR013087) - T[122-144] . - T[152-174] . - T[182-204] . - T[211-233] . - T[241-263] . - T[271-294] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
MTF1_HUMAN 62.5 % 312 9.39E-97
ZN143_HUMAN 48.045 % 178 2.96E-48
ZNF76_HUMAN 47.701 % 172 2.22E-46