- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S173.g04716.01.t
Possible name(s)
PABPC1L; TIAL1; TRNAU1AP
Gene model
Location
S173 [104,242 / 108,940]
Amino acid sequence
Length: 258
>Phmamm.CG.MTP2014.S173.g04716.01.p
MSRSLWMGDLEPYMDETFVTQAFLHISQPAGVKIIRRPSFSIFVGDLDASVTDDKLEDYF
LKRYHSVKGAKIMYEEGGVSRGYGFVRFSDEKEQKRALIEMQGAKGLGGKQIRVSVATPK
GKLATTPTVPTATEQLEALQYSQQMMQQYTEQYQYYQQYYNYYNYPQYNYYQAQQAQTSQ
AQGYQQQATAQPVEHYSSTEQYQASRQQDKLEDPNPVIDIDAENESYFAWHSSILDEVLG
NHWQPLDSLTSKIADLVT
Nucleotide sequence
Length: 777
>Phmamm.CG.MTP2014.S173.g04716.01.t
ATGTCTCGATCGTTATGGATGGGAGACTTGGAACCATACATGGATGAAACATTTGTGACT
CAAGCATTTCTTCACATAAGTCAACCTGCTGGTGTGAAAATTATAAGAAGGCCATCGTTT
TCCATATTTGTTGGTGATCTGGATGCATCCGTAACTGATGATAAATTAGAAGACTATTTT
CTCAAAAGATATCACTCTGTGAAAGGGGCAAAAATCATGTATGAAGAAGGTGGTGTTTCA
AGGGGCTATGGGTTTGTTAGATTCAGTGATGAAAAAGAACAAAAAAGAGCTCTAATTGAA
ATGCAAGGAGCAAAAGGACTTGGAGGGAAACAAATCCGAGTGAGCGTTGCAACACCGAAA
GGGAAGCTAGCTACAACACCTACTGTTCCAACTGCCACAGAGCAACTTGAAGCACTCCAG
TACAGCCAGCAGATGATGCAACAGTACACTGAGCAATACCAGTATTATCAGCAATACTAT
AACTATTACAACTATCCGCAATACAACTACTATCAGGCACAGCAAGCACAAACATCACAG
GCTCAGGGTTACCAACAGCAGGCAACAGCACAACCAGTTGAACACTACAGCTCCACAGAA
CAGTACCAAGCCAGTCGACAACAAGATAAGCTGGAAGATCCAAACCCTGTTATCGACATT
GACGCTGAAAATGAATCTTACTTTGCCTGGCATTCGTCGATTTTAGATGAAGTCCTAGGA
AACCACTGGCAGCCACTGGATTCCCTTACCTCCAAAATAGCCGATCTTGTCACGTGA
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[34-122] 2.04E-21 |
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[39-116] 3.1E-22 |
| CDD |
SECp43_RRM2 (IPR034510) - T[39-120] 8.01047E-47 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[40-119] 17.489 |
| SMART |
RRM_dom (IPR000504) - T[41-115] 3.6E-17 |
| Pfam |
RRM_dom (IPR000504) - T[42-113] 2.1E-14 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TSAP1_HUMAN | 31.481 % | 153 | 3.32E-45 |
