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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C3.553.v1....' > 
  2. Region 'REG00000414' > 
  3. > 
  4. Transcript 'Phmamm.CG.MTP2014.S1...'
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Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S172.g04695.02.t

Possible name(s)

SLCO1B1; SLCO1C1; SLCO2A1

Gene model

Phmamm.CG.MTP2014.S172.g04695

Location

S172 [140,261 / 143,145]

Sequences

Amino acid sequence

Length: 249

>Phmamm.CG.MTP2014.S172.g04695.02.p
MSQAEGAIPLLPTHPTESPPNYYSTERPHERRDGVTLMTPSPLPREDPFPERGRARTVSS
IAPMPTSFFRYGLNQTLKKSGSLSVPVSGFQTDVMASSTSLPCNANGTTYNPAIMLIIGH
VLIGCGAAPLWPLGVSYIDDHVVIRKIPVYLGIFIGTTLTGPVFGFLTGSVTSSIYVTLN
NPHHVQPSNPAWIGAWWLGYLVAGLILILFLFPFAFYPASLPVSGQKLAELAEIEVLIER
RIMVSQWGG

Nucleotide sequence

Length: 750

>Phmamm.CG.MTP2014.S172.g04695.02.t
ATGTCGCAGGCGGAGGGAGCTATTCCATTGCTTCCTACCCATCCAACTGAAAGCCCACCG
AACTATTACAGCACCGAAAGACCGCATGAGCGCCGGGATGGTGTAACACTTATGACTCCT
AGCCCTTTGCCCCGGGAGGATCCCTTTCCAGAACGGGGTCGGGCAAGGACAGTATCATCT
ATTGCCCCGATGCCCACCTCATTTTTTCGATACGGATTAAATCAAACTCTCAAGAAATCA
GGTTCCCTTTCGGTACCCGTAAGCGGTTTTCAAACTGACGTCATGGCATCGTCAACTAGC
CTTCCCTGCAACGCTAACGGCACAACATACAACCCAGCAATTATGCTTATTATTGGTCAT
GTGCTCATCGGATGTGGAGCTGCTCCACTTTGGCCACTAGGTGTCTCTTACATAGATGAT
CACGTGGTCATTCGAAAGATTCCAGTGTACTTAGGGATTTTCATTGGTACTACACTGACT
GGACCTGTTTTCGGATTTCTTACCGGGAGTGTCACTTCTTCTATCTACGTGACGTTGAAC
AATCCCCACCATGTTCAACCAAGTAACCCTGCATGGATTGGAGCATGGTGGTTAGGTTAT
TTGGTAGCTGGCCTTATTCTTATTCTGTTCTTGTTCCCCTTCGCATTTTACCCGGCTTCT
TTACCAGTGTCCGGACAAAAATTGGCTGAACTCGCAGAAATTGAAGTTTTAATTGAAAGA
AGAATCATGGTGAGTCAGTGGGGTGGGTAA

InterProScan

PANTHER
OATP (IPR004156) - T[97-226] 2.0E-49
Pfam
OATP (IPR004156) - T[99-227] 4.7E-39
SUPERFAMILY
MFS_trans_sf (IPR036259) - T[112-223] 1.83E-8
CDD
MFS_dom (IPR020846) - T[114-212] 2.24964E-4

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SO3A1_HUMAN 40.714 % 97.1 6.37E-23
SO1C1_HUMAN 37.5 % 101 1.41E-24
SO2A1_HUMAN 34.307 % 97.1 5.3E-23