- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'Boleac.CG.SB_v3.S99....' >
- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Transcript 'Harore.CG.MTP2014.S5...' >
- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S172.g04695.01.t
Possible name(s)
SLCO1B1; SLCO1C1; SLCO2A1
Gene model
Location
S172 [133,762 / 142,554]
Amino acid sequence
Length: 606
>Phmamm.CG.MTP2014.S172.g04695.01.p
LGCCVLPHFILPAPHITNSSSTDVCLPVFRYGLNQTLKKSGSLSVPVSGFQTDVMASSTS
LPCNANGTTYNPAIMLIIGHVLIGCGAAPLWPLGVSYIDDHVVIRKIPVYLGIFIGTTLT
GPVFGFLTGSVTSSIYVTLNNPHHVQPSNPAWIGAWWLGYLVAGLILILFLFPFAFYPAS
LPVSGQKLAELAEIEVLIERRIMSRSQSMVEASAALEVESCMSQSETSSVTGCVGSRRLQ
ECDDSAPVQVLSQLAEMTCAVKRTLATPLVVTAIVAYVAMANLVSGVSTFGSTYLQRTFN
VMRSTSDMLIGGVCIPLGILGTFCGGYLMKRYNFDIRQTLIYTVVMSGIGCGFFVFLFAF
GCENQKIAGITAPYSIDNSTTLNSTCNVDCHCRKGQFLMVCGSDRTNYISPCYAGCTTAV
HIQQENPFKKITEYRNCSCIADNHHKAVNGACQSSHCTGMLAAFMTMAGLGVMAVTFCQA
PVYVVLLRVLDSRDKALGIGLMAFLSRVLGYIPGPIWFGLILDKSCIYWSSKCLGKSSCL
LYNNRGLRFSYVGLCVSCAVAYVLVFVVSFVWMEYHKEKYEKTLPVPRQDGQEEDETTDE
SREWWR
Nucleotide sequence
Length: 2,649
>Phmamm.CG.MTP2014.S172.g04695.01.t
GGCTAGGATGCTGCGTCTTGCCTCATTTTATATTACCAGCACCGCACATTACCAATTCAA
GTAGTACAGATGTTTGTTTGCCAGTTTTTCGATACGGATTAAATCAAACTCTCAAGAAAT
CAGGTTCCCTTTCGGTACCCGTAAGCGGTTTTCAAACTGACGTCATGGCATCGTCAACTA
GCCTTCCCTGCAACGCTAACGGCACAACATACAACCCAGCAATTATGCTTATTATTGGTC
ATGTGCTCATCGGATGTGGAGCTGCTCCACTTTGGCCACTAGGTGTCTCTTACATAGATG
ATCACGTGGTCATTCGAAAGATTCCAGTGTACTTAGGGATTTTCATTGGTACTACACTGA
CTGGACCTGTTTTCGGATTTCTTACCGGGAGTGTCACTTCTTCTATCTACGTGACGTTGA
ACAATCCCCACCATGTTCAACCAAGTAACCCTGCATGGATTGGAGCATGGTGGTTAGGTT
ATTTGGTAGCTGGCCTTATTCTTATTCTGTTCTTGTTCCCCTTCGCATTTTACCCGGCTT
CTTTACCAGTGTCCGGACAAAAATTGGCTGAACTCGCAGAAATTGAAGTTTTAATTGAAA
GAAGAATCATGTCGAGATCTCAATCAATGGTCGAAGCCAGTGCAGCCCTCGAAGTCGAAA
GTTGTATGTCTCAATCGGAAACTAGCAGTGTTACTGGGTGTGTGGGATCAAGAAGATTAC
AGGAATGCGACGATTCAGCTCCTGTACAAGTCCTTTCGCAACTTGCAGAAATGACGTGTG
CGGTAAAAAGAACTCTCGCTACGCCTCTAGTGGTGACAGCAATTGTGGCATACGTGGCTA
TGGCAAATCTGGTATCTGGTGTTTCCACATTCGGGTCAACTTACTTGCAACGAACCTTCA
ATGTGATGAGAAGCACTTCCGACATGTTGATAGGTGGCGTCTGTATACCTCTCGGTATTC
TTGGCACATTCTGTGGTGGGTATCTCATGAAACGCTACAATTTCGATATTCGACAGACGT
TGATATACACTGTGGTTATGTCTGGCATTGGATGCGGATTTTTCGTCTTTCTTTTTGCGT
TTGGATGCGAGAACCAAAAGATCGCTGGCATCACTGCTCCCTACAGTATTGACAACAGTA
CCACATTAAACAGTACTTGCAACGTGGACTGTCACTGTCGAAAGGGTCAGTTCCTTATGG
TTTGCGGCTCAGATCGGACCAACTACATTTCACCGTGTTATGCCGGTTGCACAACAGCAG
TTCACATACAACAAGAAAATCCGTTTAAAAAAATAACGGAATACAGGAATTGTTCATGTA
TCGCTGATAATCATCACAAGGCGGTCAATGGAGCGTGCCAATCGTCGCACTGCACAGGAA
TGCTTGCCGCTTTCATGACTATGGCTGGCCTAGGTGTGATGGCTGTGACATTTTGCCAGG
CGCCTGTGTATGTTGTCCTCCTGCGTGTTCTCGATTCCAGAGATAAAGCGTTGGGTATTG
GCCTGATGGCTTTTTTATCTAGAGTTTTAGGCTATATACCTGGACCTATATGGTTCGGTC
TTATCCTCGATAAGAGCTGCATATACTGGAGCAGTAAGTGTTTGGGCAAATCTTCGTGCC
TTTTGTACAACAACCGAGGTCTTCGCTTCAGTTACGTGGGTTTGTGCGTGTCCTGTGCCG
TTGCCTACGTTCTTGTATTTGTGGTGTCGTTTGTATGGATGGAGTATCACAAAGAGAAGT
ACGAAAAAACGCTTCCCGTGCCCAGACAAGATGGACAGGAGGAGGATGAAACTACAGACG
AATCGAGAGAATGGTGGAGATAGCCCAGATGGTTGCAAAGTTTTACTAATGGTGTAGCTC
ATGGTTCCCAACCTTTATCGACGAGAAGAATTCAAAACATTTTCATTCCTTCCTATAATA
GACTAGGCCTACATAGTAGATGATAACCCATACAAAGATCATTTAAAATTAAGTCTTTTA
TGTTCAACTTGTACAGCAGGTGTATTACTATAGTTTAGCCGCTCACCTAACTTGGAGACC
ATTCCAGCTTGAAAAACCCTGGTGCTGTCTATATTAGACAGTGTATGTTTTTGTTCTTGT
GTTTGTTTGGAAAAAGAACTGGTTGAAATTAATGAAGTGTATTTTTTGCCCAAATGTGTA
TATGCTGGGGTCACAGATCCTATTGAGGACATGAGTTCCTTAATTGGCACTTTAACCGTT
TTGGAATTGCGTTTTTAAATGTGTCGTTAACTGTGAGAAATCTATTATAACTTATACGAA
CTGTCCCAACAGTTTTAATGAGCGTGATCGGCCAGTCTTTTATACTGGAGTCTTGTAGAG
TAGACGAATTAGATATTTCTGCTTGAGAACCTCCTAAACTTGGGCCATGGCTTGACTTGA
AATGGTTGTGATGAATCGAGAACTATTCGTCTTGCGTTCTAAATCTATGCATACATATTG
CTGTTGCATTTGTTTGCACGGCCACGACACCTTACCGCCAAAGTTTTTGTTCTATACTGG
AGTTCTCTATCGGTATAACAGAATACGATTGGTACGTTTTTGAGAAATTTCCCTTTGTAT
ATTTTGGTTCTTTGTGCATTAGAACTCGCCTTGCCAATCATATGTGCCGTTTTTGTCGTT
ACTAACCGT
| PANTHER |
OATP (IPR004156) - T[2-548] 3.4E-167 |
| Pfam |
OATP (IPR004156) - T[4-545] 5.9E-112 |
| TIGRFAM |
OATP (IPR004156) - T[71-570] 1.5E-103 |
| SUPERFAMILY |
MFS_trans_sf (IPR036259) - T[72-579] 1.44E-25 |
| CDD |
MFS_dom (IPR020846) - T[74-172] 0.00101333 |
| ProSiteProfiles |
Kazal_dom (IPR002350) - T[380-441] 8.572 |
| Pfam |
Kazal_dom (IPR002350) - T[387-439] 6.0E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SO1C1_HUMAN | 27.993 % | 237 | 2.72E-69 |
| SO1B1_HUMAN | 28.832 % | 218 | 2.58E-62 |
| SO2A1_HUMAN | 28.515 % | 244 | 2.98E-72 |