- Transcript 'Cisavi.CG.ENS81.R22....' >
- Transcript 'Phmamm.CG.MTP2014.S1...' >
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- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S171.g04678.01.t
Possible name(s)
LOXL2; LOXL3; LOXL4
Gene model
Location
S171 [81,103 / 83,346]
Amino acid sequence
Length: 327
>Phmamm.CG.MTP2014.S171.g04678.01.p
MLIAVCRSYRANWDILIRTMDVQCDGTESKLSECDSVAVTFNRLCYSGEAVILNCQRKAA
ESIRLRAGALVGEGRVQVANEKHWGGVCSNLWNIKSANVACRQLGFGTAKQTFTNAEFGR
SHTLVWYTNVTCNGDEKKLTDCSYEHPEVSNYLNYTSPGCSIRQQASLVCHTPDTGERKI
NLTDGEDFTVGRVTVRVNNKWGSICSDNWRINEAMVVCRQLGFGYASRALQDVRGMTSSG
NLDVVMSDVWCDGTESSLEECQTKPPQLYGIYHHCGARWRLGASYVGAVCTNSLPDLQLD
IPQLEDSIAVDFQPLWKLTCAGKFEFI
Nucleotide sequence
Length: 984
>Phmamm.CG.MTP2014.S171.g04678.01.t
ATGTTGATAGCTGTTTGCAGATCATACAGGGCAAATTGGGATATTCTTATTCGCACTATG
GATGTTCAATGCGACGGAACTGAAAGCAAATTATCAGAATGCGATAGTGTAGCGGTCACC
TTCAACAGATTGTGCTATTCAGGAGAAGCCGTAATTCTAAACTGTCAAAGAAAAGCCGCT
GAGAGCATTCGACTGCGGGCAGGTGCTTTGGTCGGGGAAGGCAGAGTGCAAGTTGCGAAT
GAAAAACACTGGGGTGGAGTTTGCAGCAATCTATGGAACATTAAAAGCGCCAACGTCGCG
TGTCGCCAACTTGGATTTGGCACAGCGAAACAAACTTTTACCAATGCTGAGTTTGGCAGA
AGTCATACACTCGTTTGGTATACCAATGTTACATGCAACGGAGATGAGAAAAAATTGACT
GACTGCTCATACGAGCACCCAGAGGTCTCGAATTACCTTAACTATACATCCCCTGGTTGT
TCAATACGGCAGCAAGCCAGCTTGGTTTGTCACACTCCTGATACTGGAGAACGGAAGATC
AATCTTACGGATGGAGAGGATTTTACAGTGGGACGTGTGACCGTCCGTGTAAACAACAAG
TGGGGAAGCATATGTAGTGATAATTGGAGAATTAATGAAGCAATGGTAGTCTGTCGCCAA
CTTGGTTTTGGATACGCTTCCAGAGCTCTGCAGGATGTGAGGGGTATGACATCTAGCGGA
AATTTGGATGTAGTTATGTCTGACGTTTGGTGCGACGGAACCGAAAGTTCGCTTGAAGAG
TGCCAGACAAAACCACCACAGTTGTATGGAATATACCATCATTGTGGTGCAAGATGGAGA
CTTGGCGCTTCCTATGTCGGCGCCGTCTGTACAAACAGTTTGCCCGATCTCCAGCTTGAT
ATTCCTCAGTTAGAAGATTCAATTGCAGTCGATTTTCAACCTTTGTGGAAGCTTACCTGT
GCAGGCAAGTTTGAGTTCATTTAA
| Gene3D |
SRCR-like_dom_sf (IPR036772) - T[58-174] 1.0E-27 - T[175-294] 5.0E-24 |
| SUPERFAMILY |
SRCR-like_dom_sf (IPR036772) - T[62-172] 2.62E-26 - T[178-292] 3.4E-23 |
| SMART |
SRCR-like_dom (IPR017448) - T[63-171] 1.0E-23 - T[180-291] 5.6E-20 |
| ProSiteProfiles |
SRCR (IPR001190) - T[63-171] 24.513 - T[180-291] 23.161 |
| Pfam |
SRCR (IPR001190) - T[68-170] 4.5E-21 - T[184-267] 4.3E-21 |
| ProSitePatterns |
SRCR (IPR001190) - T[68-105] . |
| PRINTS |
SRCR (IPR001190) - T[180-196] 2.2E-11 - T[199-210] 2.2E-11 - T[214-224] 2.2E-11 - T[247-261] 2.2E-11 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LOXL2_HUMAN | 34.234 % | 171 | 6.6E-48 |
| LOXL3_HUMAN | 33.233 % | 162 | 7.31E-45 |
| LOXL4_HUMAN | 33.24 % | 171 | 4.97E-48 |