Aniseed - Transcript Card

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S167.g04604.01.t

Possible name(s)

IDH3A; IDH3B; IDH3G

Gene model

Phmamm.CG.MTP2014.S167.g04604

Location

S167 [73,086 / 76,992]

Sequences

Amino acid sequence

Length: 387

>Phmamm.CG.MTP2014.S167.g04604.01.p
KGVQMAASGKSLIRILSRAVQRQTPCMTCGSQRFYHLGKPSLAEAKVDSDKMRVTMIPGD
GIGPELMFSVKEVFTAADVPVKFEEFWVSEVQDRCTAEHMNEVVDSVNRNKVAIKGILAT
PSWFDMGELQSVNMQIRKKLDLFANVVRVKSLPGVKTRHGDLDFVVIREQTEGEYSALEH
ESVPGVVESLKIITRTKSERIAKFAFDYATKHGRNKVTAVHKANIMKLADGMFLDSCRGI
AKLYPKIQFESMIVDNTCMQLASNPSQFDVMVMPNLYGNIIDNLAAGLVGGAGVVPGESY
SPDCVVFESGARHPFAQAVGRNIANPTAMLLCAANMLAHLNLTTHANLVKGSLMKVLRDK
KIRTTDLKGYATTTEFTNAVISNLGRS

Nucleotide sequence

Length: 1,423

>Phmamm.CG.MTP2014.S167.g04604.01.t
AAAGGGCGTGCAAATGGCAGCGAGCGGCAAAAGTCTTATCAGAATCTTATCCCGAGCTGT
GCAAAGACAAACTCCATGCATGACATGTGGCTCGCAAAGATTTTATCACCTTGGTAAACC
TTCACTAGCAGAAGCAAAAGTTGATTCTGACAAGATGAGGGTGACAATGATTCCAGGTGA
TGGCATCGGACCAGAGCTGATGTTTTCAGTGAAGGAAGTGTTCACTGCTGCTGATGTTCC
AGTCAAATTTGAAGAGTTCTGGGTCAGTGAAGTGCAAGATAGATGTACTGCTGAGCATAT
GAATGAAGTCGTTGACTCTGTCAACCGAAATAAAGTTGCTATTAAAGGTATTCTTGCTAC
ACCATCATGGTTCGATATGGGAGAGCTGCAATCAGTGAATATGCAAATAAGAAAAAAGCT
TGATCTGTTTGCAAATGTTGTTCGTGTCAAAAGTTTACCGGGCGTTAAAACCCGACATGG
TGACCTTGACTTTGTTGTCATTCGTGAACAGACTGAAGGAGAATACAGTGCACTTGAACA
TGAGAGTGTACCTGGTGTGGTAGAGTCACTTAAAATCATAACTCGCACTAAGTCTGAAAG
GATTGCCAAGTTTGCTTTTGATTATGCAACAAAGCATGGAAGGAACAAGGTCACTGCTGT
TCACAAGGCAAATATAATGAAGCTTGCTGATGGAATGTTTTTGGACTCCTGTCGTGGAAT
TGCAAAGCTCTACCCAAAAATTCAATTTGAATCGATGATTGTGGACAACACTTGCATGCA
GTTGGCCTCAAATCCCAGCCAGTTCGATGTGATGGTAATGCCCAACTTGTATGGAAATAT
CATCGACAATTTAGCTGCTGGGCTTGTGGGAGGAGCTGGGGTTGTCCCTGGAGAAAGCTA
CAGCCCTGATTGTGTTGTGTTTGAAAGTGGAGCACGGCATCCTTTCGCACAAGCCGTGGG
AAGAAACATTGCAAATCCAACAGCAATGCTTCTCTGTGCTGCAAACATGCTCGCACATTT
GAATCTTACAACCCACGCGAATCTGGTAAAAGGCTCTTTGATGAAAGTTTTACGTGACAA
AAAAATTCGCACAACAGATCTGAAGGGTTACGCCACTACCACCGAATTCACCAACGCTGT
AATAAGCAATCTTGGTCGCTCTTAAACAATACAACACCGACTGTTTTGTCATAATCGTTG
ACTGTGTCGTCACAAATTGCCCTAATTTTTTTCAAAAAAGTTCTAAATTTTGTTGTCTGA
AATTTTTTGCACAAATTTTTCGGACCAGCTTAATATTATTTAACCTCTGCAGGAAATATA
TTTTGGTAAATGTGTACGCATTGTTAAGACAGCTAACACTTTCTAGTCAAATACAGTAAT
GAAACAGAAGATCTTATTTACCAGCTTTCTGTACACATGAGCG

InterProScan

TIGRFAM	Isocitrate_DH_NAD (IPR004434) - T[51-384] 5.9E-150
SMART	IsoPropMal-DH-like_dom (IPR024084) - T[53-380] 2.0E-145
Pfam	IsoPropMal-DH-like_dom (IPR024084) - T[54-380] 1.6E-72
ProSitePatterns	IsoCit/isopropylmalate_DH_CS (IPR019818) - T[275-294] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
IDH3G_HUMAN	53.776 %	347	9.5E-118
IDH3B_HUMAN	67.674 %	463	1.14E-163
IDH3A_HUMAN	45.152 %	279	1.93E-91