- Clone 'AHC0AAA30YG03' >
- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Clone 'cien192227' >
- Transcript 'Moocul.CG.ELv1_2.S94...' >
- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S1668.g15387.01.t
Possible name(s)
LRP4; LRP6
Gene model
Location
S1668 [11,750 / 30,718]
Amino acid sequence
Length: 1,512
>Phmamm.CG.MTP2014.S1668.g15387.01.p
MYRASMVPLCQLVLITTKTTYSGLTSVARSGESTEQGLHGVAVSVGADYNKDYVFWTDVS
SKERGINRASLSHIGRITKIVSKDVFEPNGLAVDWLSKNIYWTDAQLGAIFVSNYDGDNR
VRLIGGLSEPRGIELLPFEGIMFWSDQTKGTIERAWMDGSEPTTIVQHLVWPNEVVADRV
QRRIYWIDGFTKSIESCGFDGSARKTVINYEISFKYPAFGLSLFDGRLYFGVWNKSSIYS
VTTVGSGLSSSVSGIGKNPMGIYIVNKKEQELRLSADSNLCWTQQRHCSHLCLPTSFNEH
RCACPSNTGLVIAADGQTCVHPEEFLLYTSLDDGTVMLVSMMQHASRVPTVLAQSYQPSA
VDFDPIEKMVYWSDVATNKIYRKAMNESDLEVFLEGGIGTVDGLCVDWLNRHLYFTNIGA
EIGNAPFHRIEMVDLADPYKRKIIASSGFEKPRDLVINPHNGDLYVSDWGTDPKVVRLDL
DGQNPVKLDVAVENPNGLAYHNQYLYITDSMRKSSIVQSNGTIIYRNSPKLIRYDVILEQ
SEEMEMDPVEMELPFGLTMSSNKVYLTDWELGGIYEHEVGSGRATEFIIGIRRPTGLKYA
TINTPNNLVSACTGGNNCSDICVSSDEQDYMCLCSDESGTVQSESNNWNCVPPESFILVA
DGNRIMMKSLIPDDNRQEYAVVQTFDQLSDIVAVTYDPLTSYIYWADNGRQRINRKAMDG
KGPESIETIYRNIGQVDGMTIDPVHRLLYWTDVIKGTIEVMHLRTRRHATVLDQLDKPRA
IVLTPDTGKMYWTEWGDSPMLAGAKMSGQDFQPLLADDLQWPNGIFFDKGSQKMFLADGG
TVSIQTANDGRLDYIPLIGSAQHLYGLGKIERSDSLVFSDWGNRTVMKISKYNSVFDMRT
DVLMENMVKPSQIHVQNSFNYPGPSGPCQPRIHQCSHICIPDQYEYVCLCPDHLVLANDM
RSCVTEEKAAMLTSTHAPTTTAMPTINATSAPWAVKITSATTTTTQLPTTSTPTTVAALV
ENSTLATNTSTSTTTSTTTQATTTVSTTTILTTLPPNPTFVNCDPKALSNPQLAPNQTHV
LVSPDLLGLKAVDGNRNPINVTVVDTEEKPIEFVKVDAGKHIVHFHAYDGFGQKAVCVVA
LQVTDRTPPTRISCPSDITVETYSGKSVYVNWEIPRFEDNSGLQLNVTSNHKPPPPLETY
SGKSVYVNWEIPKFQDNSGLQLNVTSNHKPGRFISGIYDIEYVAVDQHGNYETCNFVLAV
IESTTECGYPKIPENSQLSCTTDQADGIQKCLVDLDEIKTIASTKEARLIVEKGAKEIVE
MVVTKKITAKGSDSKEYPADNSTALSQALVICEEGWLMDDQGCCKLRPVTGEGSMNKIII
GGVIGGFVFLLAILLIIGFIHRRRKNNQMKKEQERKRRQRLEKEEQSDEEGAGAEEEAEI
AETNLTVKTLLNKKITLFNEFARERRKKKKKADKADSEEASGARSETETSTEQANGQISN
NGRIVILIYSFF
Nucleotide sequence
Length: 4,539
>Phmamm.CG.MTP2014.S1668.g15387.01.t
ATGTACAGGGCCTCCATGGTGCCGCTGTGTCAGTTGGTGCTGATTACAACAAAGACTACG
TATTCTGGACTGACGTCAGTAGCAAGGAGCGGGGAATCAACCGAGCAAGGCCTCCATGGT
GTCGCTGTGTCAGTCGGTGCCGATTACAACAAGGATTACGTATTCTGGACTGACGTTAGT
AGCAAGGAGCGGGGAATTAACCGAGCAAGTTTGTCGCATATTGGCCGAATCACAAAGATC
GTATCGAAAGACGTTTTCGAACCCAACGGTTTGGCGGTCGACTGGCTTTCCAAGAACATT
TACTGGACAGACGCACAACTTGGCGCCATTTTTGTTTCAAACTACGATGGAGATAATCGC
GTGCGTCTGATTGGTGGATTATCTGAACCACGTGGTATCGAACTGCTACCGTTTGAAGGG
ATAATGTTTTGGAGCGATCAAACGAAGGGGACAATCGAGAGAGCTTGGATGGACGGGAGT
GAACCAACCACGATTGTCCAACATCTCGTCTGGCCGAACGAGGTCGTCGCAGATCGTGTA
CAAAGACGTATATATTGGATTGATGGATTCACGAAAAGCATTGAGAGTTGTGGTTTCGAC
GGATCAGCTCGAAAGACTGTCATCAATTATGAGATTTCGTTCAAATACCCCGCGTTCGGT
CTTTCCCTGTTTGATGGTCGACTTTACTTCGGTGTCTGGAACAAAAGTTCGATCTACTCT
GTGACGACGGTCGGAAGCGGGTTGTCCAGTTCGGTGTCAGGAATCGGTAAAAACCCGATG
GGAATATATATTGTGAATAAAAAGGAACAGGAGCTACGGTTGTCTGCTGACTCAAACTTA
TGTTGGACCCAACAACGCCACTGCAGTCATCTTTGTCTCCCAACTTCTTTCAACGAACAT
CGATGTGCTTGTCCGTCCAACACTGGACTGGTCATCGCAGCAGATGGACAAACCTGTGTC
CATCCCGAGGAGTTCTTGCTGTACACTTCATTAGATGATGGCACAGTGATGCTGGTGTCG
ATGATGCAACATGCCTCTCGTGTTCCAACTGTACTTGCGCAATCATATCAACCTTCTGCT
GTCGATTTTGATCCAATTGAAAAGATGGTTTACTGGAGTGACGTGGCGACCAATAAGATC
TATCGGAAAGCAATGAACGAATCAGACTTGGAGGTTTTCTTGGAAGGGGGGATTGGAACA
GTGGATGGTTTATGCGTCGACTGGTTAAACCGTCATTTATATTTCACCAACATTGGTGCT
GAGATTGGCAATGCTCCATTTCACCGCATCGAAATGGTCGACCTGGCTGATCCTTACAAA
AGAAAGATTATTGCGTCATCGGGATTCGAGAAACCACGTGACCTGGTGATCAACCCACAT
AACGGTGACTTATACGTATCTGACTGGGGAACAGACCCGAAAGTGGTTCGTCTCGATCTG
GATGGACAGAACCCGGTAAAGCTGGACGTAGCAGTCGAAAACCCGAACGGCTTGGCTTAC
CACAACCAATACCTCTACATCACCGACTCTATGAGGAAAAGCTCCATAGTGCAGTCGAAC
GGCACAATCATATACCGGAATTCCCCCAAACTGATACGATATGACGTCATACTCGAGCAA
TCCGAGGAAATGGAAATGGACCCGGTTGAAATGGAGCTTCCATTCGGCCTTACGATGAGT
TCCAACAAAGTTTACCTGACAGATTGGGAGCTTGGAGGAATTTATGAACACGAGGTCGGA
TCTGGGCGGGCTACTGAGTTTATTATTGGAATCCGACGACCTACAGGATTGAAATATGCC
ACAATCAACACTCCGAATAACTTGGTATCGGCTTGCACTGGTGGAAACAACTGCAGTGAC
ATCTGCGTTTCGTCGGATGAGCAGGACTACATGTGTCTTTGTTCGGATGAGAGCGGCACT
GTTCAGTCGGAAAGCAATAACTGGAATTGTGTCCCTCCGGAGTCATTCATCCTGGTTGCT
GATGGCAACCGCATCATGATGAAGAGCTTGATCCCGGATGACAACAGACAGGAGTACGCG
GTTGTTCAGACATTTGACCAACTCAGTGATATTGTGGCGGTGACCTATGACCCACTGACC
AGCTACATATATTGGGCTGATAATGGAAGGCAGAGGATCAACCGGAAAGCGATGGACGGC
AAAGGACCGGAAAGCATTGAAACAATCTACAGGAATATAGGTCAAGTTGATGGAATGACG
ATTGATCCTGTCCATCGATTGTTATACTGGACTGATGTTATAAAGGGAACAATTGAAGTG
ATGCATTTGAGAACTAGAAGACATGCTACGGTGTTAGATCAGCTGGATAAACCCAGAGCT
ATCGTGTTGACTCCTGATACTGGGAAGATGTATTGGACAGAGTGGGGTGACAGTCCGATG
CTTGCAGGTGCCAAAATGAGCGGACAAGATTTCCAACCCTTGCTCGCCGACGACCTCCAG
TGGCCGAACGGTATATTTTTTGACAAAGGAAGTCAGAAGATGTTTCTGGCTGACGGAGGG
ACTGTCAGCATTCAAACTGCTAACGATGGACGATTGGATTACATTCCTTTGATTGGATCC
GCCCAGCATCTCTACGGTCTTGGAAAGATTGAACGGAGCGATTCCCTGGTGTTCAGTGAT
TGGGGAAACCGAACCGTTATGAAAATCAGCAAATACAACAGCGTGTTTGACATGAGAACT
GACGTTTTGATGGAAAATATGGTGAAACCTTCACAAATTCACGTCCAAAACTCATTCAAT
TATCCAGGTCCGAGTGGTCCCTGCCAGCCGAGAATTCACCAATGCAGTCATATTTGTATT
CCTGATCAATACGAATACGTCTGCTTGTGTCCTGATCATTTGGTTCTCGCTAATGATATG
AGATCGTGTGTAACAGAAGAGAAGGCTGCTATGCTCACAAGCACCCATGCCCCCACCACA
ACCGCTATGCCAACAATCAACGCCACCTCCGCACCATGGGCTGTGAAAATAACATCTGCA
ACCACAACGACCACACAGCTTCCAACCACTTCAACGCCAACCACTGTTGCAGCTTTAGTG
GAAAATTCCACACTTGCTACGAACACATCCACATCAACTACAACTTCAACCACAACACAA
GCAACAACCACTGTCTCTACCACCACAATACTAACAACACTACCTCCCAACCCGACTTTT
GTGAACTGCGACCCCAAAGCTCTCTCCAACCCGCAGTTAGCCCCCAACCAGACCCACGTC
CTCGTTTCACCCGATCTACTGGGTCTGAAAGCTGTTGACGGGAATCGAAACCCCATCAAT
GTGACGGTGGTTGATACTGAGGAGAAACCGATTGAGTTTGTGAAGGTTGATGCAGGGAAA
CATATTGTGCACTTCCACGCTTATGACGGGTTCGGGCAGAAAGCTGTTTGCGTTGTTGCT
CTGCAAGTAACAGACCGAACCCCACCCACAAGAATCTCGTGTCCCAGTGACATCACAGTT
GAAACTTACTCGGGCAAATCGGTCTACGTCAACTGGGAAATACCCAGATTTGAGGACAAC
TCCGGTCTTCAGCTGAATGTGACGTCAAATCACAAACCACCCCCCCCCCTTGAAACTTAC
TCGGGCAAATCGGTCTACGTCAACTGGGAAATACCCAAATTTCAGGACAACTCCGGTCTT
CAGCTGAATGTGACGTCAAATCACAAACCGGGTCGTTTCATCAGCGGGATTTACGATATT
GAATATGTGGCTGTGGATCAACATGGGAATTATGAAACTTGCAACTTCGTTCTGGCTGTG
ATAGAAAGCACAACCGAGTGTGGTTACCCGAAGATTCCCGAGAACAGTCAGTTAAGTTGC
ACAACCGACCAAGCTGATGGAATCCAGAAATGCCTGGTCGACTTGGATGAAATCAAAACC
ATCGCATCAACGAAGGAAGCGCGCTTGATTGTGGAAAAGGGAGCAAAGGAAATTGTGGAG
ATGGTAGTTACGAAAAAAATCACCGCCAAAGGATCGGACAGCAAAGAATATCCAGCTGAT
AATTCCACTGCTTTGTCCCAAGCTCTTGTTATTTGTGAGGAGGGCTGGCTGATGGACGAT
CAAGGCTGCTGCAAACTGAGACCTGTGACTGGAGAAGGATCGATGAACAAGATCATCATT
GGAGGAGTGATCGGAGGATTCGTTTTCCTCCTGGCGATCCTCCTCATTATCGGATTCATT
CACAGGAGGAGGAAGAACAATCAGATGAAGAAGGAGCAGGAGCGAAAGAGGAGGCAGAGA
TTGGAGAAGGAAGAACAATCAGATGAAGAAGGAGCAGGAGCGGAAGAGGAGGCAGAGATT
GCTGAAACAAATCTAACTGTGAAAACTTTGCTGAACAAAAAAATCACACTGTTTAATGAA
TTTGCAAGAGAGCGTCGTAAGAAGAAGAAGAAAGCTGACAAAGCTGATTCGGAAGAAGCG
AGTGGAGCAAGAAGTGAAACTGAAACATCGACGGAACAAGCTAATGGTCAAATTTCAAAC
AATGGTAGAATTGTCATTTTAATTTATTCCTTTTTTTGA
| Gene3D |
6-blade_b-propeller_TolB-like (IPR011042) - T[10-320] 3.1E-73 - T[321-635] 1.5E-54 - T[640-966] 1.5E-69 |
| SMART |
LDLR_classB_rpt (IPR000033) - T[34-76] 52.0 - T[78-120] 4.8E-14 - T[121-162] 1.0E-4 - T[163-204] 6.6E-5 - T[205-248] 17.0 - T[348-390] 0.0013 - T[391-440] 2.1 - T[442-485] 0.0011 - T[679-723] 2.1E-4 - T[726-768] 4.5E-5 - T[769-811] 0.22 - T[812-853] 52.0 |
| ProSiteProfiles |
LDLR_classB_rpt (IPR000033) - T[52-97] 11.572 - T[98-139] 11.804 - T[140-181] 10.922 - T[182-209] 10.017 - T[226-268] 4.471 - T[368-410] 11.363 - T[411-461] 6.513 - T[462-504] 7.812 - T[701-745] 11.084 - T[746-787] 9.274 - T[788-831] 11.038 - T[874-919] 4.61 |
| SUPERFAMILY |
Growth_fac_rcpt_cys_sf (IPR009030) - T[277-964] 7.69E-7 |
| SMART |
EGF-like_dom (IPR000742) - T[280-320] 78.0 - T[611-651] 51.0 - T[927-964] 0.11 |
| Pfam |
LDLR_classB_rpt (IPR000033) - T[788-825] 2.7E-8 |
| ProSiteProfiles |
HYR_dom (IPR003410) - T[1144-1262] 14.599 |
| Pfam |
HYR_dom (IPR003410) - T[1204-1259] 7.8E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LRP4_HUMAN | 30.457 % | 380 | 3.04E-108 |
| LRP6_HUMAN | 29.33 % | 345 | 2.37E-97 |
| LRP5_HUMAN | 29.989 % | 345 | 3.05E-97 |