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TRANSCRIPT CARD

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  1. Region 'REG00000366' > 
  2. Molecular Tool 'Neurogenin-MO (Imai 2009)' > 
  3. Transcript 'Phmamm.CG.MTP2014.S1...' > 
  4. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S165.g04562.01.t

Possible name(s)

AC004223.3; RFFL; RNF34

Gene model

Phmamm.CG.MTP2014.S165.g04562

Location

S165 [48,780 / 49,614]

Sequences

Amino acid sequence

Length: 277

>Phmamm.CG.MTP2014.S165.g04562.01.p
MQVKVKDLQLYLKNRSFSIETIKEKHELVRKIQSVEGVHEPDAETQNYSYNNMRHTNLDE
TIHEDMTTSAGEEVDAEVNVSNQFDVSEPVVPPPSYTATQSSFPTAAEFSTSATSPSSTS
SNTEATTSQSNPFPNQSASPSSKASTPRKGELLKLSEISSIDEIQDFSVRQLKYLLKDSL
VDYRGLLEKKELLNRALNLFKDNEKNQQVIDESEVPSSEPSTEARNEHVCKICWENPVDC
VFLECAHMATCIVCSKAIRECPICRETISRTVRVFKS

Nucleotide sequence

Length: 834

>Phmamm.CG.MTP2014.S165.g04562.01.t
ATGCAAGTCAAGGTGAAGGATTTGCAGCTCTACTTAAAAAACAGGAGCTTTTCTATTGAA
ACAATCAAAGAGAAACATGAATTGGTCCGAAAAATACAGTCAGTGGAAGGTGTTCATGAA
CCAGATGCAGAGACGCAAAACTATTCATACAACAACATGAGGCATACCAATCTAGATGAA
ACCATACATGAAGATATGACAACTTCGGCTGGAGAAGAGGTTGATGCTGAGGTTAATGTT
AGTAATCAATTTGATGTCTCTGAGCCTGTGGTACCACCTCCAAGTTACACTGCAACACAA
TCCAGTTTTCCTACTGCTGCCGAGTTTAGTACATCAGCAACATCTCCTAGTTCTACATCA
AGCAACACGGAAGCCACTACTTCTCAATCAAATCCATTCCCAAATCAATCAGCTTCACCC
AGTAGTAAAGCTTCTACGCCCAGAAAGGGTGAACTGTTGAAGTTGTCAGAAATTTCATCG
ATCGATGAAATACAAGACTTCAGTGTTAGGCAACTGAAGTACTTGCTCAAGGACAGTCTG
GTTGACTACAGGGGCCTTTTGGAGAAAAAGGAGCTTCTAAACCGTGCCTTAAACTTGTTT
AAAGACAATGAAAAAAACCAGCAGGTTATTGATGAAAGTGAGGTTCCTAGTTCAGAACCT
TCGACAGAAGCGAGGAATGAACATGTTTGTAAAATATGTTGGGAGAATCCAGTGGACTGT
GTGTTCTTGGAATGCGCACACATGGCAACATGTATTGTCTGCAGCAAAGCCATCAGGGAA
TGTCCCATTTGTAGAGAGACCATTTCCAGAACAGTCCGTGTCTTTAAATCATAA

InterProScan

Gene3D
Znf_RING/FYVE/PHD (IPR013083) - T[202-277] 1.4E-16
ProSiteProfiles
Znf_RING (IPR001841) - T[230-265] 10.409

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RFFL_HUMAN 30.903 % 125 9.61E-34
RNF34_HUMAN 31.359 % 108 1.68E-27