- Transcript 'KH2012:KH.C7.477.v1....' >
- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'KH2012:KH.L83.2.v1.A...' >
- Transcript 'KH2012:KH.C13.110.v1...' >
- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S1653.g15347.01.t
Possible name(s)
KCNQ1; KCNQ3; KCNQ4
Gene model
Location
S1653 [12,939 / 20,847]
Amino acid sequence
Length: 464
>Phmamm.CG.MTP2014.S1653.g15347.01.p
DVRFSIVASSNSKLTIFWSDQQESNVSSTTSXAIIGSDIKAMKPTRRSIFDRRKFQQQAY
NFLERPTGIKCFVYHVVVFMLVLVCLIFSVLSTIEGQEQDNVKVLLIMEAILVVVFSVEY
CIRLWSAGSIGKYKGLRGRLKFARKPICVIDLAVVCASATILLVGRNGNVFAASAIRGIR
FLQILRMLHVDRQGGTWRLLGSVVYIHRQELITTLYIGFLALIFSSYFVYLAEKPSIDDR
ANSGDEKRGKFRSYADALWWGVVTVTTIGYGDHVPITWLGKIIASCFSIFAISFFALPAG
ILGSGFALKVQQKQRQKQFNRQIPAAACLIQATWRCYATMEETNCSGTWRTYKLSKKREL
SNSGSCHDDVFDGRSSKTGSIKRDRPVFRIGSKESKSDETRLGRVRGFCSWTFDLKHEEN
PANEMPEAYKNAVRASRLLLYYLAKKRFQNSRKPYDVRDVVEQY
Nucleotide sequence
Length: 1,394
>Phmamm.CG.MTP2014.S1653.g15347.01.t
AGACGTTCGATTTTCGATCGTCGCAAGTTCCAACAGCAAGCTTACAATTTTCTGGAGCGA
CCAACAGGAATCAAATGTTTCGTCTACCACGTCGTGNGCTATTATCGGCAGCGATATTAA
AGCGATGAAGCCGACAAGACGTTCGATTTTCGATCGTCGCAAGTTCCAACAGCAAGCTTA
CAATTTTCTGGAGCGACCAACAGGAATCAAATGTTTCGTCTACCACGTCGTGGTGTTTAT
GTTGGTGTTGGTGTGCCTCATATTCAGTGTTCTGTCAACCATCGAAGGACAAGAACAAGA
CAACGTAAAAGTTTTGCTGATAATGGAAGCCATACTGGTTGTGGTGTTCAGTGTGGAATA
CTGTATACGTCTGTGGTCGGCTGGAAGCATCGGAAAGTACAAAGGGTTGAGAGGTCGACT
CAAATTCGCTAGAAAACCGATTTGTGTAATAGATCTTGCTGTGGTTTGTGCTTCCGCCAC
AATTTTGCTGGTTGGAAGAAATGGAAACGTATTTGCTGCGTCAGCAATCAGAGGGATCCG
GTTTCTCCAAATCTTGCGTATGTTGCACGTCGATCGGCAAGGTGGAACTTGGCGGTTGCT
AGGAAGTGTGGTTTATATTCATCGTCAGGAGCTGATCACAACTCTATACATTGGATTTCT
AGCTCTCATATTCTCATCCTACTTTGTGTATTTGGCCGAAAAGCCATCAATTGATGATAG
GGCGAATTCTGGCGACGAAAAAAGAGGAAAATTTCGGAGTTACGCTGACGCTTTGTGGTG
GGGCGTGGTTACGGTCACGACGATTGGATATGGAGATCACGTGCCCATCACGTGGTTGGG
AAAAATTATCGCTTCATGCTTTTCCATCTTTGCTATTTCCTTTTTTGCACTTCCCGCGGG
AATACTTGGATCTGGGTTTGCTCTTAAGGTTCAACAGAAACAGCGTCAGAAACAATTTAA
TCGACAGATTCCAGCCGCGGCATGTCTCATTCAAGCCACGTGGCGTTGCTATGCGACGAT
GGAAGAAACGAACTGCAGCGGCACCTGGCGGACATACAAATTATCCAAGAAGCGCGAACT
AAGCAACAGCGGCAGTTGTCATGACGACGTGTTTGATGGACGCAGCAGCAAAACTGGGTC
GATTAAGAGGGACCGTCCCGTATTTCGTATTGGTTCAAAGGAAAGCAAAAGCGACGAAAC
ACGACTAGGAAGGGTCCGCGGGTTTTGCTCATGGACTTTTGACCTTAAACACGAAGAAAA
TCCAGCCAATGAGATGCCCGAAGCATACAAGAACGCCGTAAGAGCGTCAAGGCTTTTGCT
TTATTACTTGGCCAAGAAACGATTTCAGAATTCGCGCAAACCGTACGATGTACGTGATGT
GGTCGAGCAATACT
| PANTHER |
VG_K_chnl (IPR028325) - T[29-464] 4.5E-195 |
| PRINTS |
VG_K_chnl (IPR028325) - T[65-93] 2.2E-21 - T[107-130] 2.2E-21 - T[181-207] 2.2E-21 - T[210-233] 2.2E-21 - T[251-273] 2.2E-21 - T[280-306] 2.2E-21 |
| Pfam |
Ion_trans_dom (IPR005821) - T[73-309] 5.4E-26 |
| PRINTS |
K_chnl_volt-dep_KCNQ (IPR003937) - T[115-134] 2.5E-24 - T[135-154] 2.5E-24 - T[197-216] 2.5E-24 |
| Pfam |
K_chnl_volt-dep_KCNQ_C (IPR013821) - T[418-464] 1.1E-9 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| KCNQ1_HUMAN | 71.753 % | 439 | 7.06E-149 |
| KCNQ4_HUMAN | 41.717 % | 363 | 4.22E-119 |
| KCNQ5_HUMAN | 42.796 % | 362 | 4.34E-116 |