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TRANSCRIPT CARD

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  1. Clone 'ma163m07' > 
  2. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S164.g04550.02.t

Possible name(s)

CNOT3

Gene model

Phmamm.CG.MTP2014.S164.g04550

Location

S164 [149,342 / 151,515]

Sequences

Amino acid sequence

Length: 677

>Phmamm.CG.MTP2014.S164.g04550.02.p
MADKRKLQGEMDRCFKKIVEGVETFEDIWQKLYNANNTNQKDKYESDLKKEIKKLQRLRD
QIKTWAASNEIKDKKILLDNRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQKE
KEETMQWLQVTIDSINQQIDMFESEIESMSSHSRKKKIDREKQDRIDELKVILEKHRFHI
KNLETLMRMLDNETIQPDKINIIRDDIEYYLEACQDPDYEDNEFIYEDMGLDDTLAIAAA
ASPVDKQMNSSINNSNPLNDEETTTKSPDPSPSPLNTTNHSSSSSTKDDERKRNKSDDLV
SPRKPNSNPPRSGRLPSYSTPTTTASAPISKQIPKNAHPPPVHTQPYAAAAGGMHTVTSN
HVSQTVVSSSRTSSTSESPSPTKKSQQSRPNDIAASWHTNNNHVTNSETNTSEVQSAVNS
IVSSVASLTVNGEVASTSPTSNGQMPPMLGGLNSLKTMAEQAVANAGLEQQSATSPVFTH
SDSLTSVSNHARPDLVSLVSAQQQNTQMAIGGGEARIQPLLGVAPLGPISLSKDNHYQQA
MLEACYRHMPHPSDAERLRHYLPRNPCPTPVYYHQSPLPHHDTIDFYLRLSTETLFFIFY
YMEATKAQYMAAKALKKQSWRFHTKYMMWFQRHEEPKTITDEYEQGTYIYFDYEKWGQRK
KEGFTFEYRYLEDRELQ

Nucleotide sequence

Length: 2,034

>Phmamm.CG.MTP2014.S164.g04550.02.t
ATGGCTGATAAGCGAAAACTGCAAGGCGAGATGGACCGATGCTTCAAAAAAATTGTCGAG
GGTGTGGAAACATTCGAAGACATCTGGCAAAAGTTGTACAATGCAAACAACACTAACCAG
AAAGACAAGTACGAGAGCGACCTGAAGAAGGAGATAAAGAAATTGCAACGATTAAGGGAC
CAAATCAAAACATGGGCAGCATCAAATGAGATCAAAGATAAGAAGATATTGTTGGATAAC
AGAAAGTTGATTGAAACACAGATGGAGAGGTTTAAAGTTGTTGAGAGAGAAACCAAGACC
AAAGCCTACTCGAAAGAAGGTCTTGGCCTTGCCCAAAAGGTTGATCCTGCCCAAAAAGAG
AAGGAAGAGACTATGCAGTGGTTACAAGTCACTATTGACTCCATTAACCAACAAATTGAT
ATGTTTGAGAGTGAAATTGAGTCCATGAGCTCGCATTCTCGGAAAAAGAAAATAGATCGA
GAAAAGCAAGATCGAATTGATGAATTGAAAGTCATTCTTGAGAAGCATCGGTTTCACATT
AAAAATCTTGAAACCCTAATGAGAATGCTTGACAACGAAACGATACAGCCGGATAAGATA
AACATCATTCGAGATGACATTGAGTACTATCTTGAAGCATGCCAAGATCCTGATTATGAG
GACAATGAGTTTATTTACGAAGACATGGGCTTAGATGATACACTTGCAATAGCTGCAGCT
GCTTCCCCAGTTGACAAGCAGATGAACAGTAGCATCAACAACTCAAATCCACTAAATGAT
GAAGAAACTACAACCAAATCTCCTGACCCCTCACCATCACCACTCAACACCACCAACCAT
TCTTCCTCATCCAGCACAAAGGATGATGAGCGAAAGAGGAATAAGTCTGATGACCTGGTG
TCACCACGGAAACCGAATTCCAATCCACCAAGATCCGGACGACTTCCCTCTTACTCGACC
CCAACAACGACGGCTTCTGCTCCTATTTCGAAGCAAATCCCAAAGAATGCACATCCACCG
CCAGTGCATACTCAGCCTTATGCTGCCGCTGCTGGAGGAATGCACACTGTTACCTCGAAT
CACGTCTCCCAAACTGTGGTAAGTTCATCGCGAACTAGCTCCACGTCCGAGTCCCCTTCG
CCAACCAAAAAATCCCAGCAATCAAGACCAAATGATATCGCAGCTTCGTGGCACACCAAC
AACAACCATGTAACGAATTCCGAAACGAACACGTCGGAGGTTCAAAGTGCAGTAAATAGC
ATCGTTTCGAGCGTAGCCTCTTTGACGGTCAATGGTGAAGTAGCTTCCACGTCACCAACA
TCAAATGGTCAAATGCCCCCTATGCTTGGTGGTCTCAACTCCTTGAAAACGATGGCAGAA
CAGGCGGTTGCTAACGCCGGTTTGGAGCAGCAAAGCGCCACGTCACCAGTGTTTACGCAT
TCTGATTCGCTCACGTCCGTGTCCAATCACGCACGGCCGGATTTGGTATCCCTAGTCTCG
GCGCAGCAGCAGAACACGCAAATGGCGATCGGTGGTGGCGAAGCAAGGATTCAACCTTTA
CTTGGTGTTGCTCCATTGGGGCCCATATCACTCAGTAAGGATAATCACTACCAGCAAGCC
ATGTTAGAGGCGTGTTACCGGCATATGCCACACCCCTCAGACGCTGAAAGGTTGCGTCAT
TATCTTCCGCGCAACCCTTGCCCCACACCAGTCTACTATCATCAGTCGCCTTTGCCGCAT
CACGACACGATCGACTTCTACTTGCGTCTCTCGACCGAGACACTCTTTTTTATCTTCTAC
TACATGGAGGCGACGAAAGCGCAGTACATGGCGGCTAAAGCACTGAAGAAGCAATCGTGG
CGGTTTCACACCAAGTACATGATGTGGTTCCAGCGCCACGAGGAGCCGAAGACCATCACG
GACGAGTACGAGCAAGGCACCTACATATACTTCGACTACGAAAAGTGGGGCCAAAGAAAG
AAGGAGGGATTCACGTTCGAGTATAGGTACCTGGAGGATCGCGAACTTCAGTAA

InterProScan

PIRSF
CCR4-NOT_su3/5 (IPR012270) - T[1-510] 3.6E-137 - T[456-677] 1.4E-79
Pfam
Not_N (IPR007207) - T[3-232] 1.2E-90
Gene3D
CCR4-NOT_su2/3/5_N_sf (IPR038635) - T[527-672] 2.5E-65
Pfam
NOT (IPR007282) - T[548-671] 3.3E-41

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CNOT3_HUMAN 61.562 % 358 8.47E-114