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TRANSCRIPT CARD

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  1. Molecular Tool 'pSna::Ci-Bra' > 
  2. Transcript 'KH2012:KH.L153.6.v1....' > 
  3. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S1645.g15328.05.t

Possible name(s)

SNW1

Gene model

Phmamm.CG.MTP2014.S1645.g15328

Location

S1645 [14,568 / 20,622]

Sequences

Amino acid sequence

Length: 522

>Phmamm.CG.MTP2014.S1645.g15328.05.p
MATLSSLLPEPTQVTYDQLDPIQPTSKAVISMRYEPPPYGHRKGFIPRAERDFGDGGAFP
EIPVVQFPLGMGKTKKKKEALAVQLDSEGKIRYDAIARQGHSKDRIVHSKFQQLVPKEIL
DEDDPDLQRPDEDAIREQTESTRQALEKLTNEKITAAMPVKRAEQRAPAQYIRYTPSQQG
VAFNSGAKQRVIRMVEMQKDPMEPPKFKTNKKLPQGPPSPPAPVMHSPNRKLSVKEQQDW
KVPPCISNWKNAKGHTIPLDKRLAADGRGLQSVHINENFAKLAEALYIADRKAREAVEMR
AQVERKVASKEKEAKERQLRQLAEEARNKRAGIKKDDRDDKEVKERDEIRHERHRDRQRE
RNLARAAPEKRNRLREERDISEKIALGLPNTRTAQEAQFDQRLFNKSRGMDSGFDGGDDE
GYNVYDKPWRSETQVGSSIYRPTKDKDKEMYGDDDIDKLIKSNRFVPDKGFKGADPSQSR
EGPVQFEKDEDLFGLNKFMEQAKQPTLMVEMCVTSATFAADI

Nucleotide sequence

Length: 1,569

>Phmamm.CG.MTP2014.S1645.g15328.05.t
ATGGCAACTTTGTCTAGTTTGTTGCCAGAACCAACACAGGTAACTTATGACCAGTTGGAT
CCAATTCAACCTACATCCAAAGCTGTGATTTCTATGAGATATGAGCCACCTCCATATGGA
CACAGAAAAGGTTTCATTCCACGTGCCGAGCGTGATTTTGGCGATGGTGGTGCATTTCCA
GAAATTCCAGTTGTTCAATTTCCTTTGGGAATGGGGAAAACTAAAAAGAAGAAAGAGGCA
CTTGCTGTACAACTCGATTCTGAAGGAAAGATTCGTTATGATGCCATTGCACGTCAAGGT
CACAGCAAGGACAGAATAGTACACAGTAAGTTTCAACAACTTGTCCCAAAAGAGATTCTG
GATGAAGATGACCCGGATCTTCAGCGACCTGATGAGGATGCTATAAGAGAGCAAACTGAA
TCAACCCGGCAAGCTTTGGAAAAATTAACAAATGAGAAAATAACAGCTGCAATGCCAGTA
AAAAGAGCAGAGCAGCGTGCTCCTGCACAATATATCAGATATACACCATCACAGCAAGGA
GTTGCATTCAACTCTGGGGCCAAACAACGTGTTATTCGAATGGTTGAGATGCAGAAAGAT
CCAATGGAACCTCCCAAATTTAAAACAAACAAAAAGTTGCCACAAGGTCCACCAAGCCCT
CCAGCCCCAGTAATGCATTCACCCAACCGAAAGTTGTCTGTAAAGGAGCAGCAAGACTGG
AAAGTTCCTCCCTGTATTTCAAACTGGAAAAATGCAAAGGGTCACACAATACCACTGGAT
AAACGTCTTGCAGCAGATGGTCGTGGATTACAGAGTGTCCACATCAACGAAAATTTTGCC
AAGTTGGCCGAAGCACTATACATAGCTGATAGAAAGGCCAGAGAGGCTGTTGAAATGAGA
GCACAAGTGGAAAGGAAAGTTGCATCAAAAGAGAAAGAAGCCAAGGAGCGACAACTTCGT
CAACTTGCTGAAGAGGCTAGAAATAAACGAGCTGGCATAAAGAAGGATGATAGAGATGAT
AAGGAGGTGAAAGAAAGAGATGAAATAAGACATGAAAGACACCGGGACCGCCAAAGAGAA
AGAAATCTTGCACGGGCTGCTCCCGAAAAGAGGAATCGTCTTCGTGAGGAGCGTGATATC
AGTGAAAAGATTGCACTTGGATTGCCAAACACAAGGACTGCTCAGGAGGCACAATTTGAT
CAGAGACTTTTCAATAAAAGCAGGGGAATGGACAGTGGTTTTGATGGTGGTGATGATGAA
GGTTACAATGTTTATGACAAACCATGGAGATCCGAGACACAGGTTGGAAGTAGCATCTAT
AGACCTACTAAAGACAAAGACAAGGAAATGTATGGAGATGATGACATCGACAAGCTAATC
AAAAGCAACAGGTTTGTCCCTGACAAAGGATTTAAAGGAGCAGATCCTTCACAAAGTAGG
GAAGGTCCTGTTCAGTTTGAAAAAGATGAGGATCTGTTTGGTTTGAACAAATTCATGGAA
CAAGCCAAACAGCCCACACTTATGGTGGAAATGTGTGTGACAAGTGCCACCTTTGCTGCT
GACATTTGA

InterProScan

PANTHER
SKI-int_prot_SKIP (IPR017862) - T[1-504] 1.1E-232
Pfam
SKI-int_prot_SKIP_SNW-dom (IPR004015) - T[170-330] 1.1E-71

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SNW1_HUMAN 68.555 % 683 0